Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2408 ATGTCTCTCGACTCCACAAGCCACCAAACTCCTGACTTGTATTGCAGTGAAGTAACTAGCGAAGTGTTTCACTTGGAGGATTCCGATGAGGCCTTGAAGTTGAATTGTGTTCTATGGGGAGACTCCGATAGCGATGAAAGTTGTCTATTGAGCTTATTAGAATCTGAAAATGACCAAGTACAGGAACAAACAAAATCCCCAGGACAACTTCGCAAAACATGGCTGGTTAGTCCTCGAGAAGAGGCCATAAATTGGATCCTAAAGGTGCATGCTTACTACAGTTTTAGACCCGAGACAGCTTATCTTTCTGTAAATTACCTCGATCGTTTCCTCTTGTCACACACCTTGAGGCATGATAAAGCATGGCCTCTGCAGCTGTTATCAGTTGCTTGTCTTTCACTAGCAGCTAAAATGGAAGAAACCAAAGTGCCACTTCTTTTGGACCTACAAGTGATCGACTCTAGGTTCCTCTTTAAGCCCAAAATAGTTCAAAGGATGGAACTTTTGGTTATGACCAGTCTCAAGTGGCGATTGCGCACTATAACCCCTTTTGATTTTGTTCATCTTTTCATTGCCAAGCTTTCATGCTCTGCATCCACATGGGGGGATTTAAGTTACACTGTTTCTCGTGTCTCAGATGTTATTATCAGAACATGTTTAGTCATGGATTTCTTGGTGTTTTCACCATCTACAATAGCAGCATCTGCTCTGTTATGGGTAACCAATCAATGCGTAGAAGACACGAAATCAGATTACTTCCACAAGAATATAAACATTGAGATGGTTCGCAAATGTTACAAACTAATGAAGCAGAAACAGATCATTCGCTTATCAGAACTTTATTGGGCAAGGAGTTCGCAATTATTGCCCCGAAGTCCCACCTGTGTGCTTGATAGTGCAACTATGCAAGAAAGCTGCGATGCTTACAAGCCCTGA 936 0.4209 MSLDSTSHQTPDLYCSEVTSEVFHLEDSDEALKLNCVLWGDSDSDESCLLSLLESENDQVQEQTKSPGQLRKTWLVSPREEAINWILKVHAYYSFRPETAYLSVNYLDRFLLSHTLRHDKAWPLQLLSVACLSLAAKMEETKVPLLLDLQVIDSRFLFKPKIVQRMELLVMTSLKWRLRTITPFDFVHLFIAKLSCSASTWGDLSYTVSRVSDVIIRTCLVMDFLVFSPSTIAASALLWVTNQCVEDTKSDYFHKNINIEMVRKCYKLMKQKQIIRLSELYWARSSQLLPRSPTCVLDSATMQESCDAYKP* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2408 311 SUPERFAMILY Cyclin-like 163 276 IPR036915 -
Pvu3g2408 311 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 12 303 - -
Pvu3g2408 311 SMART cyclin_7 84 172 IPR013763 -
Pvu3g2408 311 Pfam Cyclin, C-terminal domain 181 271 IPR004367 -
Pvu3g2408 311 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Pvu3g2408 311 Gene3D - 52 266 - -
Pvu3g2408 311 CDD CYCLIN 79 171 IPR013763 -
Pvu3g2408 311 Gene3D - 62 179 - -
Pvu3g2408 311 SUPERFAMILY Cyclin-like 45 178 IPR036915 -
Pvu3g2408 311 Pfam Cyclin, N-terminal domain 54 178 IPR006671 -
Pvu3g2408 311 SMART Cyclin_C_2 181 305 IPR004367 -
Pvu3g2408 311 PANTHER CYCLINS 12 303 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2408 Pvu-Chr3 45626988 45628870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2408 12 274 Core Cell Cycle Gene Families AT1G70210 39.483 2.06e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2408 K18810 - gmx:100799323 474.552