Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2399 ATGCTCACCACCCACCCTCCCTCTGACCCTCTTCTCGGTAACCTATTCTCCGCCTTCCCTGACGACTTCACCCCCTGGGACGACGACTCCCACCACCTCCTTTCCCCCAAACCCGTCACTTCCAGCTCCTGCTCCGACAAACCGGAGCCGGAGCCAGCTGAACCGGACCAACCCGTGGTCTCGGTGGTGGACGACCGGAAACTTCGGCGCATGATATCGAATCGCGAATCTGCCCGCAGGTCTCGCATGAGAAAACAGAGACACCTGGAGAACCTTCGGAACCAGTTGAGCAAGTGCAGGGTCGAAAACCGGGAACTGAATAACCGGTTGCAGTTCGTACTGCACCACCGTAACCGCCTCCGAACCGAAAACGAATGGCTCCGGTCCCAGCGAACCTTCCTCCTCCAAAAAGTGGCCAACTTAACCCAAACTTTGATTTTCCAACAATTCCAACAAGCCATCTCCCCTGCATGGACATGTAACACTTCGCTCATCCCAATTAATCAAGTTAATTAA 516 0.5484 MLTTHPPSDPLLGNLFSAFPDDFTPWDDDSHHLLSPKPVTSSSCSDKPEPEPAEPDQPVVSVVDDRKLRRMISNRESARRSRMRKQRHLENLRNQLSKCRVENRELNNRLQFVLHHRNRLRTENEWLRSQRTFLLQKVANLTQTLIFQQFQQAISPAWTCNTSLIPINQVN* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2399 171 SMART brlzneu 62 126 IPR004827 GO:0003700|GO:0006355
Pvu3g2399 171 MobiDBLite consensus disorder prediction 27 57 - -
Pvu3g2399 171 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 69 84 IPR004827 GO:0003700|GO:0006355
Pvu3g2399 171 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 64 127 IPR004827 GO:0003700|GO:0006355
Pvu3g2399 171 Coils Coil 75 109 - -
Pvu3g2399 171 Gene3D - 65 116 - -
Pvu3g2399 171 SUPERFAMILY Leucine zipper domain 66 116 IPR046347 GO:0003700|GO:0006355
Pvu3g2399 171 Pfam bZIP transcription factor 66 124 IPR004827 GO:0003700|GO:0006355
Pvu3g2399 171 PANTHER BZIP TRANSCRIPTION FACTOR 44 30 162 - -
Pvu3g2399 171 PANTHER BZIP TRANSCRIPTION FACTOR 30 162 - -
Pvu3g2399 171 CDD bZIP_plant_GBF1 67 116 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2399 Pvu-Chr3 45546264 45546779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2399 1 149 bZIP Transcription Factor Family AT3G49760 38.994 2.96e-26 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu3g2399 bZIP_1 6.7e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2399 - - gmx:100809244 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0094 2 1083466 1084467 Pvu3g2399 3 45546264 45546779 PCT