Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2381 ATGCGACTCCTCCTCTGCCCCCTCTTCTTCATCGTCTTCTTCATCTTCCATTCTCACAAACTCACTGCTGCGCGCATCTCAGAATATCGCGCGCTTCTATCTTTCAAAGCCTCTTCCATAACAGACGACCCTACCAATGCTCTCTCCTCCTGGAACTCCTCCACCACCTACTGTTCCTGGTTAGGCATCACCTGCGACTCCCGCCTCCACGTCACCACCCTTAACCTCACCTCCTCCTCCCTCTCCGGCACTCTCTACGATCATCTCTCCCACCTCCCTTTCCTCTCCTACCTCTCCCTCGCCGACAACCAGTTCTCCGGTCCCATTCCCGCATCTTTCTCCTCTCTCTCCGCCCTCCGCCATCTCAACCTCTCCAACAACGCCTTCAACGCCACCTTCCCCTCCAACCTCTCGCGCCTCGCCAACCTCCAAGTCCTTGACCTCTACAACAACAACATGACCGGTCCCCTCCCCCTCGCCGTCGCCTCCATGCCCCTCCTCCGCCACCTCCACCTCGGCGGCAACTTCTTCTCCGGCCAGATCCCCCCCGAGTATGGTACCTGGCAGCACCTCCAGTACCTCGCCGTCTCCGGCAACGAGCTCTCGGGAAACATCCCTCCGGAGCTCGGAAACCTCACCGCGCTTCGCGAGCTCTACATAGGCTACTACAATGCTTATTCCGGCGGCATCCCGCCGGAGATTGGAAACCTGTCCCAGCTGGTCCGTTTCGACGCCGCGTATTGCGGACTCTCCGGCGAGATTCCAGCTGATCTTGGAAGGCTTCAGAATATGGACACTCTGTTTCTTCAGGTGAATGCGCTCTCGGGCTCGCTCACTCCTGAGCTGGGGAACCTGAAGAGCCTCAAGTCGATGGATCTGTCCAACAACATTCTCTCCGGCGAGGTTCCGGCGAGCTTTACAGAGCTCAAGAATCTCACTCTGCTGAACCTCTTCCGGAACAAGCTCCACGGTGCCATTCCCGAGTTTGTCGGAGAGTTGCCGGCACTTGAGGTGTTGCAGCTTTGGGAGAACAACTTCACCGGAAGCATTCCTCAGAGTTTGGGAAGAAATGGAAAACTCACCGTCGTCGATCTTTCTTCGAACAAATTAACGGGAATGCTTCCTCCGGATATGTGTTATGGGAATCGTCTTCAGACTCTGATAACTCTCGGGAATTATCTGTTCGGTCCCATTCCTGATTCGATTGGGAAGTGTGAGTCTTTGAATAGGATTCGAATGGGGGAGAACTTTCTTAATGGTTCTATTCCTATCGGTCTTTTTGGGCTTCCGAAACTCACCCAAGTCGAGCTTCAGAACAATCTTCTCACGGGGCAGTTTCCCGAGGGTGGTTCCATTGCTGTTAATCTCGGTCAGATTAGTCTCTCTAATAACAAGCTCTCTGGGTCGTTGCCACCCACTATTGGAAACTTCACCAGCATGCAGAAGCTTCTTCTCGACGGTAACAAATTCTCTGGTCAAATCCCTTCGCAAATAGGCAGGCTGCAACAGCTTTCCAAAATTGATTTTAGCCGTAACGAATTTTCGGGTCCCATTGCTCCTGAGATAAGTCGGTGCAAGCTTTTGACCTTCATTGATCTCAGCCGCAATGAGCTCTCTGGTGAGATTCCAAACCAGATAACTGCCATGCGGATATTGAATTACCTCAACCTTTCAAGAAACCATTTGGTTGGCTCCATTCCAGGCTCCATAGCTTCTATGCAAAGTTTAACTTCTGTTGATTTTTCCTACAACAATCTCTCTGGTTTGGTTCCTGGAACAGGGCAGTTCGGCTACTTTAACTATACCTCTTTCCTTGGGAACCCTGAACTCTGTGGTCCTTATTTGGGTCCTTGTAAAGACGGGGTTTCAAATGGCCCTCGTCAACCTCACCTTAAAGGTCCTCTTTCTTCCTCTTTGAAGCTTCTGTTAGTTGTAGGGTTGCTTGTGTGCTCCATCGCATTTGCTGTTGCAGCAATAATCAAAGCTCGGGCTTTGAAAAAGGCTAGTGAAGCTCGTGCGTGGAAATTAACCGCATTCCAGCGTTTGGACTTCACTGCTGATGATGTTTTGGATTCCTTGAAGGAGGACAACATAATAGGAAAGGGAGGTGCAGGCATTGTGTACAAAGGTGCAATGCCGAATGGGGATCAGGTTGCCGTGAAAAGGTTACCTGCCATGAGCAGAGGATCTTCGCATGACCATGGTTTCAATGCTGAGATTCAGACTTTGGGGAGGATTCGACACAGACACATTGTTAGACTGTTGGGTTTCTGTTCAAACCACGAGACAAATCTCTTGGTGTACGAGTATATGCCTAATGGAAGTTTAGGTGAGGTTCTTCATGGCAAGAAAGGTGGTCATTTGCATTGGGACACAAGGTATAAAATTGCTGTGGAGGCCTCGAAGGGCCTTTGCTATCTTCACCACGACTGTTCGCCACTCATTGTCCATCGAGATGTTAAATCCAACAATATTCTTCTTGATTCCAACTTTGAAGCTCATGTTGCGGATTTTGGGCTCGCTAAGTTCCTGCAAGATTCTGGAACATCCGAATGCATGTCTGCAATTGCCGGTTCGTATGGATACATAGCTCCAGAGTATGCCTACACGTTAAAAGTTGACGAGAAAAGTGACGTGTACAGCTTTGGAGTTGTTCTTTTGGAGCTTGTAACAGGCAGGAAACCAGTTGGGGAGTTTGGTGATGGTGTGGACATTGTGCAATGGGTGAGGAAAATGACGGACTCAAACAAGGAAGGAGTTCTAAAGGTTCTTGATCCTAGACTTCCCTCAGTTCCACTCCATGAGGTGATGCATGTTTTCTATGTAGCCATGCTATGTGTTGAAGAACAGGCAGTGGAGCGACCAACAATGCGAGAAGTTGTTCAAATCCTGACTGAGCTTCCAAAGTCAGCAAGCTCAAAACAGGGAGACTTAACAATCACGGAGTCCTCTCTGCCATCATCAAACAGTTTAGAGTCTCCAACCACGGCATCTATGGAACCTAAAGATAATCAACATCTTCCTCAGTCTTCACCACCTGATCTTCTTAGCATTTGA 3057 0.4966 MRLLLCPLFFIVFFIFHSHKLTAARISEYRALLSFKASSITDDPTNALSSWNSSTTYCSWLGITCDSRLHVTTLNLTSSSLSGTLYDHLSHLPFLSYLSLADNQFSGPIPASFSSLSALRHLNLSNNAFNATFPSNLSRLANLQVLDLYNNNMTGPLPLAVASMPLLRHLHLGGNFFSGQIPPEYGTWQHLQYLAVSGNELSGNIPPELGNLTALRELYIGYYNAYSGGIPPEIGNLSQLVRFDAAYCGLSGEIPADLGRLQNMDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNILSGEVPASFTELKNLTLLNLFRNKLHGAIPEFVGELPALEVLQLWENNFTGSIPQSLGRNGKLTVVDLSSNKLTGMLPPDMCYGNRLQTLITLGNYLFGPIPDSIGKCESLNRIRMGENFLNGSIPIGLFGLPKLTQVELQNNLLTGQFPEGGSIAVNLGQISLSNNKLSGSLPPTIGNFTSMQKLLLDGNKFSGQIPSQIGRLQQLSKIDFSRNEFSGPIAPEISRCKLLTFIDLSRNELSGEIPNQITAMRILNYLNLSRNHLVGSIPGSIASMQSLTSVDFSYNNLSGLVPGTGQFGYFNYTSFLGNPELCGPYLGPCKDGVSNGPRQPHLKGPLSSSLKLLLVVGLLVCSIAFAVAAIIKARALKKASEARAWKLTAFQRLDFTADDVLDSLKEDNIIGKGGAGIVYKGAMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEASKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKSASSKQGDLTITESSLPSSNSLESPTTASMEPKDNQHLPQSSPPDLLSI* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2381 1018 Gene3D Transferase(Phosphotransferase) domain 1 771 984 - -
Pvu3g2381 1018 Pfam Leucine Rich Repeat 287 308 IPR001611 GO:0005515
Pvu3g2381 1018 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 1005 - -
Pvu3g2381 1018 Gene3D Ribonuclease Inhibitor 380 619 IPR032675 -
Pvu3g2381 1018 Gene3D Ribonuclease Inhibitor 25 219 IPR032675 -
Pvu3g2381 1018 Pfam Protein tyrosine and serine/threonine kinase 695 964 IPR001245 GO:0004672|GO:0006468
Pvu3g2381 1018 SMART serkin_6 693 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2381 1018 SMART LRR_typ_2 116 140 IPR003591 -
Pvu3g2381 1018 SMART LRR_typ_2 92 115 IPR003591 -
Pvu3g2381 1018 SMART LRR_typ_2 477 501 IPR003591 -
Pvu3g2381 1018 SMART LRR_typ_2 358 381 IPR003591 -
Pvu3g2381 1018 SMART LRR_typ_2 573 596 IPR003591 -
Pvu3g2381 1018 SMART LRR_typ_2 285 308 IPR003591 -
Pvu3g2381 1018 SMART LRR_typ_2 164 190 IPR003591 -
Pvu3g2381 1018 SMART LRR_typ_2 333 357 IPR003591 -
Pvu3g2381 1018 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 5 1005 - -
Pvu3g2381 1018 SUPERFAMILY Protein kinase-like (PK-like) 688 964 IPR011009 -
Pvu3g2381 1018 Gene3D Phosphorylase Kinase; domain 1 660 770 - -
Pvu3g2381 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Pvu3g2381 1018 SUPERFAMILY L domain-like 359 618 - -
Pvu3g2381 1018 Pfam Leucine rich repeat 70 128 IPR001611 GO:0005515
Pvu3g2381 1018 ProSiteProfiles Protein kinase domain profile. 693 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2381 1018 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Pvu3g2381 1018 SUPERFAMILY RNI-like 74 395 - -
Pvu3g2381 1018 MobiDBLite consensus disorder prediction 972 1018 - -
Pvu3g2381 1018 Gene3D Ribonuclease Inhibitor 220 379 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2381 Pvu-Chr3 45294634 45298812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2381 18 1018 Receptor kinase-like Gene Family AT5G65700 78.728 0.0 1594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu3g2381 PK_Tyr_Ser-Thr 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2381 - - gmx:100499646 1811.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0077 2 878645 882943 Pvu3g2381 3 45294634 45298812 PCT