Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2373 ATGGCTGGTTTGGATTTAGGAAGCGCTTCACGCTTTGTTCAAAACCTTCACAGACCGGACTTGCACTTGCAGCAGCTCCATCGCGATTCGGAGGACCAAGAGACGCCGCCGCCGAACCGCGGAAGCTTGCCGTTCGAAGACGATGACCAAAGCCAAGGATTGGAGCTAGTTTCAGCGGGTCCCGGTGACGTGGTCGGTCGGCGTCCACGTGGCAGGCCGCCGGGATCCAAGAACAGGCCGAAGCCGCCGGTGATAATCACGCGGGAGAGCGCCAACACGCTCCGCGCGCATATCCTCGAGGTCGGAAGCGGCTCCGACGTTTTCGACTGCGTCACCACCTACGCGCGCCGCCGCCAGCGTGGGATCTGCATCCTCAGCGGCAGCGGCACCGTCACTAATGTCAGCCTCCGCCAGCCCGCTGCTGCAGGCGCCGTCGTAACGCTCCACGGCCGCTTCGAGATTCTTTCCCTCTCCGGCTCCTTCCTCCCGCCGCCGGCTCCGCCTGGGGCGACAAGTCTGACTATCTACCTCGCCGGAGGGCAGGGCCAGGTCGTGGGAGGAAACGTGGTTGGAGAGCTGACCGCAGCGGGGCCGGTGATCGTCATCGCCGCGTCGTTCACGAACGTAGCCTACGAGAGGCTACCATTAGACGAAGAAGAACAGCTTCAGATTCAGCCACCTGCTACGACGTCGTCTCATGGCGTTGGAAATAACAACAGCAACAATAACAATAACAACTCTTTCCCCGAACCTTCTTCGGGACTTCCCTTCTTCAACTTACCTCTGAATATGCAGAACGTTCAGTTACCCGGGGAGGGTTGGGCGGGAAACGCCGCTTCACGTCCACCACCTTTTTGA 858 0.6049 MAGLDLGSASRFVQNLHRPDLHLQQLHRDSEDQETPPPNRGSLPFEDDDQSQGLELVSAGPGDVVGRRPRGRPPGSKNRPKPPVIITRESANTLRAHILEVGSGSDVFDCVTTYARRRQRGICILSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELTAAGPVIVIAASFTNVAYERLPLDEEEQLQIQPPATTSSHGVGNNNSNNNNNNSFPEPSSGLPFFNLPLNMQNVQLPGEGWAGNAASRPPPF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2373 285 ProSiteProfiles PPC domain profile profile. 91 228 IPR005175 -
Pvu3g2373 285 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 225 - -
Pvu3g2373 285 PIRSF ESCAROLA 7 284 IPR014476 GO:0003680
Pvu3g2373 285 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 208 IPR005175 -
Pvu3g2373 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 283 IPR014476 GO:0003680
Pvu3g2373 285 MobiDBLite consensus disorder prediction 227 254 - -
Pvu3g2373 285 MobiDBLite consensus disorder prediction 24 84 - -
Pvu3g2373 285 CDD DUF296 95 178 IPR005175 -
Pvu3g2373 285 Gene3D - 94 230 - -
Pvu3g2373 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2373 Pvu-Chr3 45100342 45101199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2373 1 283 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 67.213 2.54e-104 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2373 - - pvu:PHAVU_003G230600g 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0070 2 762566 763876 Pvu3g2373 3 45100342 45101199 PCT