Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2363 ATGGGAGGGGCAACACTGCCACCAGGATTTCGTTTCCATCCAACTGATGAGGAACTGGTGGGATACTACCTTAAAAGAAAAGTAGAGGGGCTTGAAATTGAGCTTGAAGTCATCCCTGTGATTGATTTTTACAAATTCGATCCCTGGGAGTTGCCGGAGAAGTCTTTCCTTCCAAAACGGGATATGGAATGGTTTTTCTTTTGTCCGCGGGATCGCAAGTATCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGGTATTGGAAAGCCACTGGAAAAGACAGAAAGGTGGTGTGCCAGTCTAATCCATCCAATGTTACAGGGTACCGCAAGACCTTGGTTTTCTATGCTGGGAGGGCCCCTTTAGGAGATAGAACTGATTGGGTCATGCATGAGTATCGCCTCTGTGATGATCTTGGCCAACCCACACCATCTTTCCTGGGTGGTTTTGCCTTGTGCCGGGTTATTAAGAAGAATGAGAAGGCAAGTGCTACACAGGGAGAAAACAAGGGCAAAAGGGCTGGAAGCAGTTCCATCAATGGGACTGACACCTCAGTGAGATTCTCTGGTGAGCAGCCATTCAGCAACTCTGGTGATTCTTCCTCTCAAGCGAGCCACCTGAATAATGAGAGTCGTTATTCAAGCCCAATTTCTTCTCCATACAATGTGCCTCCAATGGGAGAGATTAACCTAGCTTCTCTGGAAACCAATCCTTCAAACTTCTGGATCTCCCCTGACATGATTCTTGATTCTTCAAAGGACTACCCTGAATTACAACATGCTGTGGCTGAATATTTTCCAGGGTATGACTTACCACGTATGGGGACACAATTTCAATCATTGGAACATTCGGAAACTCCATCTAGTTTCTCCTACTCAAATGTCAATGGAGAAGTTGAATTTGCTGATACTCTCAGTCAAATAATGTCACCTTACTCAGGACAATGGAATTCCATGGACTTCTACGGAAAAGGAGGTGTCCCTTATGAAGATCATGATCAAATTAACTCAATCTCATATCCATGA 1029 0.4461 MGGATLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSNPSNVTGYRKTLVFYAGRAPLGDRTDWVMHEYRLCDDLGQPTPSFLGGFALCRVIKKNEKASATQGENKGKRAGSSSINGTDTSVRFSGEQPFSNSGDSSSQASHLNNESRYSSPISSPYNVPPMGEINLASLETNPSNFWISPDMILDSSKDYPELQHAVAEYFPGYDLPRMGTQFQSLEHSETPSSFSYSNVNGEVEFADTLSQIMSPYSGQWNSMDFYGKGGVPYEDHDQINSISYP* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2363 342 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Pvu3g2363 342 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 342 - -
Pvu3g2363 342 MobiDBLite consensus disorder prediction 162 221 - -
Pvu3g2363 342 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 342 - -
Pvu3g2363 342 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Pvu3g2363 342 MobiDBLite consensus disorder prediction 170 221 - -
Pvu3g2363 342 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Pvu3g2363 342 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2363 Pvu-Chr3 45005030 45007752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2363 1 301 NAC Transcription Factor Family AT4G17980 53.443 4.95e-108 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu3g2363 NAM 1.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2363 - - gmx:100792714 604.749