Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2333 ATGAAGTGTTTCTTCTTCAAAGACAAGTGTAAATCCGCCCCCGAATTGCATAAGAAGAAAAACCCCGCCGTGAACCGCGCCGCCAACTCCACCGGCTCCCTATCTTCGCCCAAGAGCGTGAAGGACTTGTACAGAGAGAAAGAGAACAGCTTCAGAGTTTTCACTTTGCAAGAGCTCAGAGATGCTACCCAAGGTTTCAATAGGACGCTCAAAATTGGAGAAGGGGGGTTCGGGAGTGTGTATAAAGGATCCATCAGACCCTCCGATGGACAGGGTGATCCATTTCCAGTAGCAATCAAAAGGCTCAACACGCGTGGCTTCCAGGGTCATAAAGAATGGCTTGCTGAAGTTCAATTTCTTGGCATTGTTAATCACCCAAATTTGGTTAAGCTTTTGGGGTACTGCTCCGTGGATGGAGAAAGAGGAATCCAACGACTGTTGGTGTACGAGTTCATGCCCAACGGGAGCTTGGAGGATCACCTATTCAATAAAAGTTTACCATGCATGCCTTGGAAAACAAGATTGGAGATTATGCTTGGTGCTGCTCAAGGATTAGCTTATCTCCATCAAGGACTGGAAATTCAGGTGATCTACCGAGATTTCAAATCTTCAAATGTTCTATTGGATGCGGATTTCCATCCAAAGCTCTCAGATTTTGGTCTTGCTAGAGAAGGACCACAAGGTGATCAGACTCATGTATCCACTGCGGTGGTTGGAACACAAGGGTATGCTGCACCAGAGTACATTGAAACGGGTCATCTGAAAGTTCAGAGCGACATGTGGAGTTTTGGTGTAGTGCTGTATGAGATCCTCACAGGAAGAAGATCACTGGAAAGAAACCGTCCCTCAGCAGAACAAAAGCTTCTAGATTGGGTCAAACAGTACCCTGCTGACACCAGCAGGTTCGTGGTGATAATGGATCCACGTCTCAGGAACCAGTATTCTCCCCAAGGAGCTCGCAAAATAGCCAAGTTAGCGGATAGTTGCTTGAAGAAGAATCCAGAAGATAGACCATCCATGAGTCAGATAGTGGAAGCCTTGCAGCAAGCATTGCAACATTCAGAAACTTCAAACTCTTCTCAGGACATTGCTGAATCCTCCTCATCCCGGTCTAAATTGGTCAGAAAAAGTAAATAG 1137 0.4617 MKCFFFKDKCKSAPELHKKKNPAVNRAANSTGSLSSPKSVKDLYREKENSFRVFTLQELRDATQGFNRTLKIGEGGFGSVYKGSIRPSDGQGDPFPVAIKRLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGERGIQRLLVYEFMPNGSLEDHLFNKSLPCMPWKTRLEIMLGAAQGLAYLHQGLEIQVIYRDFKSSNVLLDADFHPKLSDFGLAREGPQGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPSAEQKLLDWVKQYPADTSRFVVIMDPRLRNQYSPQGARKIAKLADSCLKKNPEDRPSMSQIVEALQQALQHSETSNSSQDIAESSSSRSKLVRKSK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2333 378 MobiDBLite consensus disorder prediction 348 378 - -
Pvu3g2333 378 CDD STKc_IRAK 72 349 - -
Pvu3g2333 378 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL20-RELATED 17 370 - -
Pvu3g2333 378 ProSitePatterns Protein kinases ATP-binding region signature. 72 100 IPR017441 GO:0005524
Pvu3g2333 378 Gene3D Transferase(Phosphotransferase) domain 1 152 374 - -
Pvu3g2333 378 Gene3D Phosphorylase Kinase; domain 1 46 151 - -
Pvu3g2333 378 Pfam Protein tyrosine and serine/threonine kinase 71 347 IPR001245 GO:0004672|GO:0006468
Pvu3g2333 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Pvu3g2333 378 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2333 378 SUPERFAMILY Protein kinase-like (PK-like) 48 347 IPR011009 -
Pvu3g2333 378 MobiDBLite consensus disorder prediction 348 370 - -
Pvu3g2333 378 PANTHER OS01G0588500 PROTEIN-RELATED 17 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2333 Pvu-Chr3 44650279 44653072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2333 3 347 Glycoside Hydrolase AT3G07070 43.137 3.31e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu3g2333 PK_Tyr_Ser-Thr 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2333 - K00924 gmx:100305403 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0026 2 246431 249799 Pvu3g2333 3 44650279 44653072 PCT