Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2324 ATGGAGGAACGGTATGAGCCATTGAAGGAGCTTGGTTCTGGGAATTTTGGTGTGGCCAGGTTGGCCAGAGACAAGAAGACTGAAGAGCTTGTTGCGGTCAAATACATAGAGAGGGGTAAAAAGATTGATGAGAATGTTCAGAGGGAGATAATTAATCACCGATCTTTAAGGCATCCAAATATAATCAGGTTCAAAGAGGTCTTGCTGACCCCGACTCATTTAGCCATTGTCTTGGAGTATGCTTCAGGTGGTGAACTTTTTGAGAGAATATGTACTGCTGGTCGATTTAGCGAAGATGAGGCAAGATATTTCTTCCAGCAGCTAATATCCGGGGTTAGCTACTGTCATTCAATGGAAATTTGTCATAGAGATCTGAAATTGGAAAACACTCTCCTGGACGGAAAACCATCTCCTCGACTTAAAATTTGTGACTTTGGTTACTCCAAGTCTGCTCTACTGCACTCTCAACCTAAATCAACAGTTGGAACTCCTGCATACATTGCTCCAGAGGTTCTGTCACGAAAGGAGTATGATGGGAAGATTTCAGATGTTTGGTCCTGTGGTGTGACTCTTTATGTCATGTTAGTTGGTGCATACCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGACTATTGGGAGAATAATTGGTGTTCAGTACTCCATACCCGACTATGTTCGTGTTTCTTCTGAGTGTAGGAATCTCCTCTCTAGCATCTTTGTTGCCGATCCTGCCAAGAGGATCACCATCCCAGAGATAAAACAGAATCCTTGGTTTCTGAAGAATTTGCCTAAAGAGATAATCGAAGCTGAAAGAAAAGGATTTGAGGAACCAAAGAAAGACCAACCAAGCCAAAAGGTGGAAGAAATCATGAAGATCATACAAGAAGCAAGGGTACCAGGACCAGGATCCAAAGCTGGTGATGGTATTGGTGGGCATGGTGGTACTGGATCATTAGATATTGAGGATGTCGAGGAAATTGATGTTAGTGGTGACTATGAACATGTGTGA 1017 0.4248 MEERYEPLKELGSGNFGVARLARDKKTEELVAVKYIERGKKIDENVQREIINHRSLRHPNIIRFKEVLLTPTHLAIVLEYASGGELFERICTAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGKPSPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKISDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGVQYSIPDYVRVSSECRNLLSSIFVADPAKRITIPEIKQNPWFLKNLPKEIIEAERKGFEEPKKDQPSQKVEEIMKIIQEARVPGPGSKAGDGIGGHGGTGSLDIEDVEEIDVSGDYEHV* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2324 338 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2324 338 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Pvu3g2324 338 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2324 338 PANTHER SERINE/THREONINE KINASE 3 330 - -
Pvu3g2324 338 CDD STKc_SnRK2 4 260 - -
Pvu3g2324 338 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Pvu3g2324 338 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Pvu3g2324 338 MobiDBLite consensus disorder prediction 300 338 - -
Pvu3g2324 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Pvu3g2324 338 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2324 338 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 330 - -
Pvu3g2324 338 SUPERFAMILY Protein kinase-like (PK-like) 3 272 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2324 Pvu-Chr3 44540721 44544971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2324 4 287 CBL-interacting serine-threonine protein kinases AT4G24400 40.667 1.59e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pvu3g2324 Pkinase 1.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2324 K14498 - gmx:100817713 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0022 2 216889 220079 Pvu3g2324 3 44540721 44544971 PCT