Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2311 ATGGGCAAGCAAGGGCCTTGCTATCACTGTGGAGTTACAAGCACACCACTTTGGCGTAATGGGCCACCTGAGAAGCCTGTACTATGCAATGCATGTGGATCTCGATGGAGGACTAAAGGAACACTTGCAAATTATACCCCTTTGCATGCACGGGCAGAAAATGTTGATTATGAGGATCAAAAGGTTTCCAGGGTAAAAAGCATATCATTAAATAAGAACAAAGAAGTGAAATTGGTCAAGCGAAAGCATAATTATGATATTGCTGCATCTGGAGGGTTCATTCCAGATTTTAATCAAGGACACCGAAAGGTTGTGGATGAAGATACAAGCAATAGATCAAGCTCAGGGTCTGCTGTCTCTAACTCGGAGAGCTGTGCTCAATTTGGTGGCACAGATGCTAGTGATTTGACAGGCCCTGCTCAGTCAGTGGTCTGGGATGCCATGGTGCCTTCTAAAAAGAGGACATGTTCAGGTCGTCCAAAGCCTTCATCTGTTGAGAAGCTCACAAGAGACCTGTGTACTATTCTTCATGAACAACAGTCTTATTTCTCTGCATCTTCTGAAGAGGATCTTCTTTTTGAAAGTGACACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCATTCTCATCAGGCATCCTAGCTCTATAACTCGTGATGAAGAGTCTGAGGCTAGCTCTCTTTCAGTTGATAATAAACAATGCCTAATGAATGAAGCATATTCATTCTCTAGTACGATTCCTTTGTATAATAGTGATCACATTGGCATGAACTTCTCATCTCATGGAGTTGAAAAGATCAAAAGCTCTGCTGGCCAAATCATGCAACAAGAGAAACTTGAAAGGGACAAGTCTCAGCTTGAAAAACTACAAGTTCCTGGAAATCACAATTCACTGTTGTGCTCAATAGATTTAAATGATGTAGTGAATTACGAGGAGTTTATGAGGAACTTGACAAATGAAGAGCAGCAGCAATTACTGAAGTATCTCCCTGTGGTTGATACCGCTAAATTTACTGATAGCCTTAAAAACATGTTCAGTAGCTTCCAATTCAAGGAGAACTTGATTTATTTTCAGCAACTTCTTGGGGAAGGTGTCTTTGACATCTCTTTGTTGGGGAAAAAACCTGAAGAATGGAAGACATTGAAAAGGCTTGTGTTATCTAATATGTCAAAGTCAAAATGGGTTGAACAGTATAATTTTCTCAAGAAATGCGAAAAAGAAGCTGGAAAAACTATTGGTCTGGGATCTACTGCTATGGAATCAAGTAATGTTACAAATGGCAAGAGAATGCGTGAGCATGACAGCCAAAATCCAAAATTTTCAGAAATGAAGACAACAATGAGGAGCCCCAAAAGGGTGATCATAAAGCCTATCTGTGAAGGCAAAGAAGTTGTAGAAGAAGGCTCAAGCTTCAGCCCAAAAAGCCTATTTGCTTTGCCCCATGGTGTTGGTGACTTGCACGTGCTGGATTCTTTTAACTATGTTGGTGAGAGTTCTGAGGATCTGCTGTTAGATGTGCCTTCTAACAGTTCTTTTCCGCAGGCAGAGCTCCTGCTCCCAACTTTAAGCTATGGTGCTAAGGTCTGCACCACTAGTAGCTCAATACACTCAACTGTTACGCATCCTTAA 1632 0.4136 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAENVDYEDQKVSRVKSISLNKNKEVKLVKRKHNYDIAASGGFIPDFNQGHRKVVDEDTSNRSSSGSAVSNSESCAQFGGTDASDLTGPAQSVVWDAMVPSKKRTCSGRPKPSSVEKLTRDLCTILHEQQSYFSASSEEDLLFESDTPMVSVEIGHGSILIRHPSSITRDEESEASSLSVDNKQCLMNEAYSFSSTIPLYNSDHIGMNFSSHGVEKIKSSAGQIMQQEKLERDKSQLEKLQVPGNHNSLLCSIDLNDVVNYEEFMRNLTNEEQQQLLKYLPVVDTAKFTDSLKNMFSSFQFKENLIYFQQLLGEGVFDISLLGKKPEEWKTLKRLVLSNMSKSKWVEQYNFLKKCEKEAGKTIGLGSTAMESSNVTNGKRMREHDSQNPKFSEMKTTMRSPKRVIIKPICEGKEVVEEGSSFSPKSLFALPHGVGDLHVLDSFNYVGESSEDLLLDVPSNSSFPQAELLLPTLSYGAKVCTTSSSIHSTVTHP* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2311 543 MobiDBLite consensus disorder prediction 110 132 - -
Pvu3g2311 543 MobiDBLite consensus disorder prediction 418 444 - -
Pvu3g2311 543 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Pvu3g2311 543 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Pvu3g2311 543 MobiDBLite consensus disorder prediction 105 132 - -
Pvu3g2311 543 PANTHER OSJNBB0038F03.10 PROTEIN 1 543 IPR044589 -
Pvu3g2311 543 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 296 407 IPR044867 -
Pvu3g2311 543 PANTHER GATA TRANSCRIPTION FACTOR-LIKE PROTEIN 1 543 - -
Pvu3g2311 543 Gene3D - 3 84 IPR013088 GO:0006355|GO:0008270
Pvu3g2311 543 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Pvu3g2311 543 CDD ZnF_GATA 6 55 IPR000679 GO:0006355|GO:0043565
Pvu3g2311 543 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Pvu3g2311 543 Pfam Asx homology domain 288 376 IPR028020 -
Pvu3g2311 543 Gene3D - 284 386 IPR038108 -
Pvu3g2311 543 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2311 Pvu-Chr3 44382105 44388060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2311 1 519 C2C2-Gata Transcription Factor Family AT4G17570 51.481 1.34e-149 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pvu3g2311 ASXH 4.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2311 - - gmx:100799745 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0015 2 110266 116534 Pvu3g2311 3 44382105 44388060 PCT