Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2292 ATGGACATGGAAGAATCAAACCCCATGGAAAGAGAAGTTCAACCTACCACCTCATCATCCTCTTTCTCCATTACTCCCTCCACCTCCACCTCCACCTCCTCCTCCTCCTCCTCCTCCTCTTACATAGACCAACAACCATCAAACACCAAGGACAAAAAAAACAAGAGAACCAACATTAACACCAATCATGGGAACCACCCCACGTATAGAGGAGTGCGCATGCGCCAATGGGGCAAATGGGTATCCGAAATCAGAGAGCCAAGGAAGAAGTCAAGAATTTGGCTTGGAACTTTTCCCACGCCGGATATGGCGGCTCGAGCGCACGACGTGGCGGCTCTCACCATCAAAGGCAGCTCGGCCTTCCTCAATTTCCCCGAATTAGCTGCCGAGCTGCCCCGCCCCGCCACCAACTCCCCCAAGGATATCCAAGTGGCCGCCGCCAAAGCCGCCGCCTTGGATTTCAACCACCGGAGCCATGAAGCTGAGTCCGAGCTGAGCCGCGGCGGCTCCATTTCCAATTCATCATCGAATTCGTCGTTGAAGGGCGAGGATGACACATTCATGGACCTTCCCGATCTCTCTCCGGACTTGAGCCATGGAGCTGATGAGTTTCATTATTCCTCGGCTTGGCTTGTAACCGGACCGGAACTGGGTTTTCGGCTTGAGGAGCCTTTTCTTTGGGAATCATATTAA 693 0.5325 MDMEESNPMEREVQPTTSSSSFSITPSTSTSTSSSSSSSSYIDQQPSNTKDKKNKRTNINTNHGNHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAFLNFPELAAELPRPATNSPKDIQVAAAKAAALDFNHRSHEAESELSRGGSISNSSSNSSLKGEDDTFMDLPDLSPDLSHGADEFHYSSAWLVTGPELGFRLEEPFLWESY* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2292 230 MobiDBLite consensus disorder prediction 10 47 - -
Pvu3g2292 230 SUPERFAMILY DNA-binding domain 68 126 IPR016177 GO:0003677
Pvu3g2292 230 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Pvu3g2292 230 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Pvu3g2292 230 CDD AP2 69 127 IPR001471 GO:0003700|GO:0006355
Pvu3g2292 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 17 227 - -
Pvu3g2292 230 MobiDBLite consensus disorder prediction 157 192 - -
Pvu3g2292 230 SMART rav1_2 68 131 IPR001471 GO:0003700|GO:0006355
Pvu3g2292 230 MobiDBLite consensus disorder prediction 165 183 - -
Pvu3g2292 230 ProSiteProfiles AP2/ERF domain profile. 68 125 IPR001471 GO:0003700|GO:0006355
Pvu3g2292 230 Pfam AP2 domain 67 117 IPR001471 GO:0003700|GO:0006355
Pvu3g2292 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 227 - -
Pvu3g2292 230 MobiDBLite consensus disorder prediction 1 71 - -
Pvu3g2292 230 Gene3D AP2/ERF domain 68 126 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2292 Pvu-Chr3 44044998 44045690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2292 61 226 AP2-EREBP Transcription Factor Family AT2G44940 50.495 4.30e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu3g2292 AP2 9.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2292 - - gmx:100812293 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0586 2 5810982 5811876 Pvu3g2292 3 44044998 44045690 PCT