Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2286 ATGGGTGCCTACAAGTATGTCTCGGAGCTCTGGCGCAAGAAGCAGTCCGATGTTATGAGATTCTTGCAGCGGGTGAGGTGTTGGGAATACCGCCAGCAACCTTCAATTGTTCGTTTGACAAGGCCTACTCGCCCAGACAAGGCTCGCCGCCTGGGTTATAAGGCTAAGCAGGGTTATGTGGTTTACCGTGTACGTGTGAGGAGGGGTGGCAGGAAGAGACCAGTTCCCAAAGGTATTGTTTACGGTAAGCCAACCAACCAAGGTGTTACTCAATTGAAGTTTCAGCGCAGCAAGAGGTCTGTTTCTGAGGAGCGAGCAGGAAGGAAGTTGGGTGGCCTCAGGGTCCTCAATTCTTACTGGGTGAATGAGGACTCAACCTACAAATATTTTGAGGTCGTTCTGGTGGATGTTGCCCACAGTGCTGTAAGAAATGATCCAAGAATCAACTGGCTGTGCAATCCAGTCCATAAACACAGGGAACTTCGTGGCCTCACTTCCGCTGGGAAAAGTAACAGGGGTTTACGTGGCAGAGGACATCTGTACCACAAAAATCGTCCATCCCGCCGGGCAACCTGGAAGAGAAACAACACTCTTTCTCTTCGTCGTTATCGCTGA 615 0.5057 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVSEERAGRKLGGLRVLNSYWVNEDSTYKYFEVVLVDVAHSAVRNDPRINWLCNPVHKHRELRGLTSAGKSNRGLRGRGHLYHKNRPSRRATWKRNNTLSLRRYR* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2286 204 MobiDBLite consensus disorder prediction 175 189 - -
Pvu3g2286 204 ProSitePatterns Ribosomal protein L15e signature. 46 69 IPR020925 GO:0003735|GO:0005840|GO:0006412
Pvu3g2286 204 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 195 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pvu3g2286 204 MobiDBLite consensus disorder prediction 164 189 - -
Pvu3g2286 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 IPR000439 GO:0003735|GO:0005840|GO:0006412
Pvu3g2286 204 Pfam Ribosomal L15 2 190 IPR000439 GO:0003735|GO:0005840|GO:0006412
Pvu3g2286 204 Gene3D Ribosomal protein l15e 1 204 IPR024794 GO:0003735|GO:0005840
Pvu3g2286 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 - -
Pvu3g2286 204 SMART Ribosomal_L15e_2 2 193 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2286 Pvu-Chr3 43950473 43952734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2286 1 204 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 91.176 1.52e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2286 K02877 - gmx:100306052 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0589 2 5840769 5842878 Pvu3g2286 3 43950473 43952734 PCT