Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2271 ATGGCTCCACTCTTCATCTTGCAAATGTTTCTGCTTTTCAGTTGTTGCATATTACTTCATGCAACAACTGTAACATGCACAAACCACCCCAAAATGGTGTCTTCCACAAACTCATCCAAATGGGTCGGACCCACCGGACACCGAGTAATCACCGTCGACATTAACGGCGGAGGCCATTTCCGATCAGTCCAAGCCGCCGTCAATGCTGTCCCGGACAACAACAGAATGAACGTCCTTATTCAGATAAGCCCCGGATATTACATAGAGAAGGTGGTAGTGCCCGTGACGAAGCCGTACATTACATTTGAAGGAGCGGGAAGAGATGTGACGGTGATAGAATGGCATGATAGGGCCAGTGACCCTGGTCCCAACGGCCAACAACTGCGTACTTACAGAACAGCTTCTGTTACAGTTTTTGCCAACTATTTCTCTGCTAGGAATATCAGCTTCAGGAACACTTCTCCGGCGCCGATGCCGGGAATGGAGGGGTGGCAAGCTGCGGCGTTTCGCATTTCAGGGGACAAAGCCTATTTCTCCGGCTGCGGCTTCTACGGTGCACAAGACACTCTTTGCGACGATGCTGGCCGTCATTACTTCAAAGAATGTTACATTGAGGGTTCCATAGATTTCATTTTTGGAAATGGCAGGTCCATGTACAAGGATTGCAGGCTACACTCAATTGCCACAAGGTTTGGGTCAATAGCAGCCCAAGATAGGAAATCCCCATACGAGAAAACAGGCTTCGCATTCGTACGGTGCAAGGTGACAGGAACAGGCCCGATTTATGTGGGCCGTGCAATGGGCGAGTACTCTAGGATTGTCTATGCCTACACCTACTTCGACAACATAGTTGCACATGGTGGTTGGGATGATTGGAACACTTCTTACAATAACAAGACTGTGTTCTTTGGAGTGTACAAATGCTGGGGACCAGGTGCTGCTGCTATACGTGGAGTTCCATTAGCCCAAGAGCTAGATTTTGAATCTGCTCATCCATTCCTGGTCAAGAGTTTTGTTAATGGGAGACACTGGATGGCACCCTCTGATGCTTAG 1053 0.4872 MAPLFILQMFLLFSCCILLHATTVTCTNHPKMVSSTNSSKWVGPTGHRVITVDINGGGHFRSVQAAVNAVPDNNRMNVLIQISPGYYIEKVVVPVTKPYITFEGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFRNTSPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCRLHSIATRFGSIAAQDRKSPYEKTGFAFVRCKVTGTGPIYVGRAMGEYSRIVYAYTYFDNIVAHGGWDDWNTSYNNKTVFFGVYKCWGPGAAAIRGVPLAQELDFESAHPFLVKSFVNGRHWMAPSDA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2271 350 Gene3D - 45 349 IPR012334 -
Pvu3g2271 350 Pfam Pectinesterase 50 341 IPR000070 GO:0030599|GO:0042545
Pvu3g2271 350 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 349 - -
Pvu3g2271 350 ProSitePatterns Pectinesterase signature 2. 204 213 IPR033131 -
Pvu3g2271 350 PANTHER PECTINESTERASE 68-RELATED 23 349 - -
Pvu3g2271 350 SUPERFAMILY Pectin lyase-like 47 347 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2271 Pvu-Chr3 43767814 43772398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2271 7 350 Carbohydrate Esterase AT5G47500 72.334 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2271 - - gmx:100796327 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2271 3 43767814 43772398 Pvu3g2271 3 43767814 43772398 ECH
Pvu2g0653 2 7024916 7027439 Pvu3g2271 3 43767814 43772398 PCT