Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2243 ATGTCATCCTCTTCCACCACAATATCACTGGACCACCTCCCTCCTTCCGAACAGCTTTGTTATGTTCACTGCAATATTTGTGACACCGTCCTCGCTGTAAGCGTTCCCTGCACAAGCTTGTTCAAGACAGTTACTGTCCGATGCGGTCATTGCACTAACCTCCTGCCAGTGAACATGCGCGGCCTGCTTGTGCCATCTCCCACTCAATTTCATTTGGGTCACTCTTTCTTCTCCCCGTCCCATAACCTTCTGGAGGAGATACCAAACCCCTCTCCAAATTTTCTTATGAACCAAACAAATTTAAGTGTTTCAAATGAGTTCTCTATGCCTGCTAGGACCGCAGCTGATGAGCTTCCACGGCCACCGATCATAAACAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCAGCGTACAACCGCTTTATCAAGGACGAGATCCAACGCATCAAGTCTGTCAATCCCGATATAACTCACAGGGAAGCCTTCAGTGCAGCTGCCAAGAATTGGGCCCACTTCCCACACATCCACTTTGGTCTCATGCCTGATCAGACTGTGAAGAAGACAAATGTGTGCCAGCAGGAAGGAGAAGAGGTTCTCATGAAAGATGGGTTTTATGCTTCAGCTAATGTTGGTGTCTCACCCTACTAA 648 0.4846 MSSSSTTISLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLVPSPTQFHLGHSFFSPSHNLLEEIPNPSPNFLMNQTNLSVSNEFSMPARTAADELPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVCQQEGEEVLMKDGFYASANVGVSPY* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2243 215 SUPERFAMILY HMG-box 123 172 IPR036910 -
Pvu3g2243 215 PANTHER PROTEIN YABBY 6-RELATED 1 213 IPR006780 GO:0007275
Pvu3g2243 215 Pfam YABBY protein 15 179 IPR006780 GO:0007275
Pvu3g2243 215 Gene3D High mobility group box domain 124 187 IPR036910 -
Pvu3g2243 215 PANTHER PROTEIN YABBY 4 1 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2243 Pvu-Chr3 43407696 43410807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2243 26 213 C2C2-YABBY Transcription Factor Family AT4G00180 59.330 1.45e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pvu3g2243 YABBY 1.3e-70 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2243 K25796 - gmx:100798441 436.032