Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2242 ATGAACACATTTTCGCATGTACCTCCAGGCTTTCGGTTTCATCCGACAGATGAAGAGCTCGTAGGTTACTACCTTAGGAAGAAGGTGGCGTCTAAAAGGATTGATCTAGATGTCATAAAAGATGTAGATCTCTATAAAATTGAACCATGGGATCTCCAAGAGTTATGCAAAATAGGAACAGATGAACAAAGTGACTGGTATTTCTTCAGTCATAAAGATAAGAAATACCCAACTGGAACTCGGACAAATAGAGCTACAAAAGCAGGATTCTGGAAAGCGACAGGAAGAGACAAGGCAATATACTCTAAGCATTGCCTGATTGGCATGAGAAAGACTCTTGTGTTTTACAAAGGAAGAGCCCCAAATGGACAGAAGTCTGATTGGATCATGCATGAGTACAGGCTAGAAACTAATGAAAATGGAACTCCTCCGGAAGAAGGCTGGGTTGTGTGTAGAGTGTTCAAGAAGCGAATGACTACAATGCAGAAAGTGGGAGAGTATGATCAGTCACCCTGTTGGTACGATGAGCAAGTTTCCTTCATGCAAGATTTTGAATCCCCCAGGCGCATTTCTCAGCCTTATGCATCATACCATCAGCACCATCCCTGCAAACCTGAGCTCATGGAATTGCAATACAACAACATACCCCACGATGCATTCCTCCAACTTCCACAACTTGAAAGCCCCAAAGTTACTCACTCAGCAGCCAGTTTGAGTTGCAGCTCAGTTGTCCCATTTGGTTATGAAAGCAGCAATAACAAAAACAATGGAAGCACCTTGCAGTTCTCATCACTCACTCAGGAAGAACAGATACAATACTGCCACCAACAAAGTCAAAATTCCCTCTATTGTACCAATGATAATGCGGTTGACCAAGTCACAGATTGGCGAGTACTTGACAAATTTGTTGCTTCTCAGCTCAGTCACAACCAAGATGTTTCCAAGGAGACCAGTTATTCCAATGCACCTATTTTCCACGTGGCTGAACAAATTTCTGTGGTAGCCAATGGATCCAAAAAGGAGCAAATTTCCCAGGAATATGCTTCAACATCTACCTCCAGTTGCCAGATTGACCTGTGGAAGTGA 1086 0.4291 MNTFSHVPPGFRFHPTDEELVGYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGTDEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPPEEGWVVCRVFKKRMTTMQKVGEYDQSPCWYDEQVSFMQDFESPRRISQPYASYHQHHPCKPELMELQYNNIPHDAFLQLPQLESPKVTHSAASLSCSSVVPFGYESSNNKNNGSTLQFSSLTQEEQIQYCHQQSQNSLYCTNDNAVDQVTDWRVLDKFVASQLSHNQDVSKETSYSNAPIFHVAEQISVVANGSKKEQISQEYASTSTSSCQIDLWK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2242 361 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Pvu3g2242 361 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Pvu3g2242 361 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Pvu3g2242 361 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Pvu3g2242 361 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 350 - -
Pvu3g2242 361 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2242 Pvu-Chr3 43378154 43384221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2242 1 361 NAC Transcription Factor Family AT1G12260 57.412 6.69e-139 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu3g2242 NAM 1.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2242 - - gmx:100783529 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0631 2 6630531 6634110 Pvu3g2242 3 43378154 43384221 PCT