Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2238 ATGGCAACAAAGCTACTGTGGCTTTCTCTGCTCATTCTAAATCTGGTCATTCACATGTCTAACACAGCAGAATCCGCAACTACGAAGCTATCCAACCCAAAGGCGACAACAGACTTCATCAAGTCCTCATGCAAGGAGACGCGCTACCCGGTGGCGTGCGTTCAAAGCCTCTCAGGCTACGGCAGCAAGATTGGGCAGAGCGAGGAAGAACTAGTGACCACTGCCCTGGCCGTGAGCGTATCAAAGACTCGATCGTGTGCATCGTTTCTTAAGAAGATGGAGAAGGTGAAGGGAATGAAAGTAAAAGAGTACAATGCGGTGCGAGATTGCATAGAGAACATGGATGATAGCGTGGAACGGCTTAACCAATCGGTGAAGGAGCTCGGCCTCCTGGGTAAGCCGAAGGGGAAGGATTTCCGGTGGCACATGAGTAATATTCAGACTTGGGTTAGTGCTGCTATCACTGATCAGGACACGTGTCTTGACGGCTTTGATGGGCTCCACCTTGGTGCTAATTTCAAGGCTGCCATTAAACCTAGGGTTCTGGATGCTTCTCAACTCACCAGTAATGCTCTTGCATTGGTTAATCGCTTTGCCTCCAAATACCGCACTACTCAGACGCCGTGA 627 0.4992 MATKLLWLSLLILNLVIHMSNTAESATTKLSNPKATTDFIKSSCKETRYPVACVQSLSGYGSKIGQSEEELVTTALAVSVSKTRSCASFLKKMEKVKGMKVKEYNAVRDCIENMDDSVERLNQSVKELGLLGKPKGKDFRWHMSNIQTWVSAAITDQDTCLDGFDGLHLGANFKAAIKPRVLDASQLTSNALALVNRFASKYRTTQTP* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2238 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 17 202 - -
Pvu3g2238 208 PANTHER PECTINESTERASE INHIBITOR 9 17 202 - -
Pvu3g2238 208 CDD PMEI-like_3 42 200 - -
Pvu3g2238 208 SMART PMEI_2 35 194 IPR006501 GO:0004857
Pvu3g2238 208 Pfam Plant invertase/pectin methylesterase inhibitor 38 194 IPR006501 GO:0004857
Pvu3g2238 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 199 IPR035513 -
Pvu3g2238 208 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 196 IPR006501 GO:0004857
Pvu3g2238 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 198 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2238 Pvu-Chr3 43330138 43330998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2238 19 195 Carbohydrate Esterase AT3G14310 28.652 1.06e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2238 - - gmx:100789460 264.618