Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2230 ATGGGTTCACAACAGAACAACGGCACCAGCTACCCTCCTTCGGAGCCCAAGCCCTGCGCCAACAACTGCGGTTTCTTCGGCAATCCCGATAACGAAAACCTCTGTTCCAAATGCTACAAGCAACACCAGAACCAGCTTTCTGCAATAAACTCTCTCTTCTGTCCTTCCGCCGCGCCGCCACCGCTTCTTGACGCGGCAGAACCATCATCTTTGGCGGTGTCTTCGCCGTGCGCGGCCGGGCCTTCCAAACCGACCAATCGATGCGGGGGTTGCAACAGAAAAGTGGGTTTAACGGGTTTCTTGTGCAAGTGTGGGATCACCTTCTGCGGGGTGCACCGTTACCCGGAGAAGCACCAGTGCACCTATGACTTCAAGAGTGCTGGGCGTGAAGAGATTGCCAAGCAAAATCCTGTTATAAAGGCTGACAAGATTCAAAGGTTTTAG 444 0.5383 MGSQQNNGTSYPPSEPKPCANNCGFFGNPDNENLCSKCYKQHQNQLSAINSLFCPSAAPPPLLDAAEPSSLAVSSPCAAGPSKPTNRCGGCNRKVGLTGFLCKCGITFCGVHRYPEKHQCTYDFKSAGREEIAKQNPVIKADKIQRF* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2230 147 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1 1 147 - -
Pvu3g2230 147 Pfam AN1-like Zinc finger 88 124 IPR000058 GO:0008270
Pvu3g2230 147 SMART AN1_Zf_4 88 125 IPR000058 GO:0008270
Pvu3g2230 147 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Pvu3g2230 147 Gene3D - 1 65 - -
Pvu3g2230 147 Gene3D - 66 143 IPR035896 -
Pvu3g2230 147 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 147 - -
Pvu3g2230 147 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 45 - -
Pvu3g2230 147 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Pvu3g2230 147 SUPERFAMILY AN1-like Zinc finger 81 142 IPR035896 -
Pvu3g2230 147 ProSiteProfiles Zinc finger AN1-type profile. 82 128 IPR000058 GO:0008270
Pvu3g2230 147 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2230 Pvu-Chr3 43251925 43252368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2230 13 147 C2H2 Transcription Factor Family AT3G52800 37.888 5.31e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2230 - - vun:114175511 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2230 3 43251925 43252368 Pvu3g2230 3 43251925 43252368 ECH