Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2229 ATGACCGTGGAAAACATGGTAAAATTAAAGCAGAAATTGATTACAAAAGTTTACATAGAACTAGACAAATTCACAATGGAGTACGAAAGGCAGCAGAAGGAATTTCAGGAGGATATTGAAGGATTCACCACAGAAGGACAGCATCGGATATCAGAGGCCCAGAAAGGCTATTCGGATTCACTGGAGAAGGAAAGAATGAAATATCAGAAAAACTATAATAAGGAATCAATTAAGGTGCTAGAAGAGAAGGTGATGGAGAATAAGAAAAAGTACGAGGATTTTTGTATGACATCTACTGTAGAGATGGCCATTGTGCCTGCTGAGGAAGTAGTCATTTTGAAAAAAATACTTCAGAAAGAGACTCTTTTAAGAAATGCTACCGAAGGGGAGCTAAATCATCTGAAAAATCAAATGGAAGAAATGAAAATGTTGGAGGCATCAAGAGAGTCAGATATCTCAAAACTTCGTAAGATGTTGGAAGATGAGGCACACCAGAAGGAGAAACTCAAAGGAGAAATAGCCAGATTGCAAAGTCAACTGCTACAATTAGGTTCTGAAGTTGGAAAAACAAAACAAAAATGTCGTCGAGGTGGATTTGAGAAAGTTGCTGGTGGTTTAGATTATTCTCCCCCTTTCCTGGTTAAACATCCACAGCAAGCTTCAGGAAATGGAGAGGAGGCCTCGGTTGCCAAGCTCTGTGAACATGGGGGATTGCAGAAGATTCTGTCATTGCTTGAATCAGAAAATGCTGATGCACAAATCCATGCCGTGAAAATAATAGCTAATTTAGCTTGTGAAGAAAGAAACCAGAAGAAGATTGTAGAAGCAGGTGGACTTACGTCCTTGCTTACACTGCTTAAGAACTCAAAAGATGAAACCACACATAGAATTGCAGCAAGCGCCATAGCAAATTTGGCAATGAATGAAACCAATCAAGATCTCATTGCGGCTCAAGGAGGCATTAATTTACTATCCATGACAGCAGCCAATGCTGAAGATCCTCAGACTCTTCGAATAGTTGCTGGAGCAATAGCTAATCTTTTTGGCAATGATAAACTACAAATAAAGATAAGGGATGAAGGTGGTATGAAGGCACTGTTGGGAATGACCAGATGCAAGCATCCCGATGTACATACCCAGGTTGCCCGCGCAATAGCCAACTTTGCAAAATGCGAGTCTAAAGCATCTATTCAAGGGACAAAGGTTGGAAGATCTTCACTTATTGTGGACGGTTTGCTTCCATGGATAGTGCAAAACGCAAGTAATGAAGTCTCGTTAGTGAGGCATGACATTGAGATTGCTCTCTGCCACTTGGCAAAACATGAAGCAAATGCAAGAGACATGATTAGTGGAGGTGCAATGGGAGAGTTGGTTCGAGTCTCAAGAGATTGTTCAAGAGAAGACATAAGGATTCTTGCACGTGAAACACTAATCTCCAACCCCGCATTCCAACCTGAAATTAGGCGTTCGGAACAGAATAATGTTGAATAA 1491 0.4071 MTVENMVKLKQKLITKVYIELDKFTMEYERQQKEFQEDIEGFTTEGQHRISEAQKGYSDSLEKERMKYQKNYNKESIKVLEEKVMENKKKYEDFCMTSTVEMAIVPAEEVVILKKILQKETLLRNATEGELNHLKNQMEEMKMLEASRESDISKLRKMLEDEAHQKEKLKGEIARLQSQLLQLGSEVGKTKQKCRRGGFEKVAGGLDYSPPFLVKHPQQASGNGEEASVAKLCEHGGLQKILSLLESENADAQIHAVKIIANLACEERNQKKIVEAGGLTSLLTLLKNSKDETTHRIAASAIANLAMNETNQDLIAAQGGINLLSMTAANAEDPQTLRIVAGAIANLFGNDKLQIKIRDEGGMKALLGMTRCKHPDVHTQVARAIANFAKCESKASIQGTKVGRSSLIVDGLLPWIVQNASNEVSLVRHDIEIALCHLAKHEANARDMISGGAMGELVRVSRDCSREDIRILARETLISNPAFQPEIRRSEQNNVE* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2229 496 Coils Coil 152 186 - -
Pvu3g2229 496 PANTHER KINESIN-RELATED 1 486 IPR027640 GO:0003777|GO:0007018
Pvu3g2229 496 Coils Coil 117 144 - -
Pvu3g2229 496 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 277 320 IPR000225 GO:0005515
Pvu3g2229 496 SUPERFAMILY ARM repeat 225 477 IPR016024 -
Pvu3g2229 496 SMART arm_5 266 307 IPR000225 GO:0005515
Pvu3g2229 496 SMART arm_5 224 265 IPR000225 GO:0005515
Pvu3g2229 496 SMART arm_5 350 390 IPR000225 GO:0005515
Pvu3g2229 496 SMART arm_5 308 349 IPR000225 GO:0005515
Pvu3g2229 496 Gene3D - 111 479 IPR011989 -
Pvu3g2229 496 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 236 278 IPR000225 GO:0005515
Pvu3g2229 496 Pfam Armadillo/beta-catenin-like repeat 268 306 IPR000225 GO:0005515
Pvu3g2229 496 PANTHER KINESIN-LIKE PROTEIN KIN-UA 1 486 IPR033291 GO:0008017|GO:0032886|GO:0048364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2229 Pvu-Chr3 43242034 43247476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2229 232 391 U-box Gene Family AT5G62560 26.250 1.47e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2229 - - pvu:PHAVU_003G216300g 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2229 3 43242034 43247476 Pvu3g2229 3 43242034 43247476 ECH