Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2214 ATGAATTTCCTTCATCTCCTCCTTCTGTGTCTGTTGGTTGCACTTTCCAGTTCACACCTGGTTCGTGGAAATGCAGAGCTAAGAGCTCTGATGGACCTCAAAAAATCTCTGGACCCAGAGGACACGCTCCTTGGCTCATGGACCAGTGATGGTGATCCATGCAGTGGTTCGTTCTTGGGGGTTGCGTGCAACCAGCATAACAAAGTGGCCAATATATCATTGCCAGGAAGAGGTCTTTCTGGCCGTGTCTCTCCAGCAGTGGCTGAACTCAGATGCTTGTCAGGTCTATACCTACAATTCAACCGTCTCTCTGGGGACATACCCAGAGAGATTGCAAATCTAAAAGAATTGCTCGACCTCTATCTCAATGTTAATTATCTATCTGGAACTATTCCTCCTGATATCGGGAACATGACTAGCCTCCAAGTGCTGCAGTTAGGCTATAACCAGTTAGAGGGGAAGATACCTAAGGAACTGGGTTCATTGAAGCAGCTTAATGCTATGTCTTTGCAACATAACAAATTAACTGGTCAGATTCCTCTAACCTTGGGTAGCTTGGAGAAGCTAAAGATGCTATATTTGAGCTCTAACAACTTCAATGGCATAATCCCTGCAACACTAGCTGATATTGCAAACTTGGAAGTTCTAGATATTCAAAACAATTCTCTTTCAGGGACTGTTCCTTCTGCATTGAAGAGATTAGGGGAAGGATTCAAAGGTGAAAACAACCCAGATCTCTGCGCAGTAGGGTTTTCTACTTTGAAAGCTTGCAACAGTGATAAAATATTAGGCATTGGTCAGATTAGTTCCCCAAATATATCCTTAAATAATAATCCCTCAGTAACTTTGACGAATCCTGCAAATACCCACTCGCAGAGTAACCAGATCCATTGCTCAAAATCAAGAGGGTTTCTTCATCTTGTCATTGCAGCAAGTGTTACAACTACCATAATTACATTCTTAAGCTCTGGAATTTTCATATTTGTCAGATACCGCCGCCAAAGGGAGAGGGTTAGGAACACATCAGATTGTTCTGAAAGCCAACTTAGTCCTTACCTGCCTAAAGATTTCTATAGAAGTTCATCTCCACTTGTTAATCTTGAGAATTATTATAATGGTATGGACTCACCGGCTGATGGTCAAAATGCAAATGGATTATCCCTTGAATATTTGCACCGTTTTAGATTTAATATTGATGAGATAGAATCAGCAACGCAGCACCTTTCTGAGGCCAATCTATTGGGTAAGAGCAAACTCTCAGCAGTCTATAAAGGTGTTCATAGAGACGGTTCTCTTGTGGCTATTAGAAGCATTAGCGTGACTTGCTGCAAAACCGAGGAAGATGAATTTTTGAAGGGGTTGATCCTATTAACCACTCTGAGACATGAAAATATTGTTAAGATGAAAGGTTTCTGTTACTCAAGAAGCAGAGGGGAATGGTATTTTGTCTACGACTTTGCCACCAGGGGTAATCTGTCTCAATATCTTGACAAGGAAGATGGAAGTGACAGTGTACTTGAATGGTCCAAGAGGGTTTCTATCATCAGGGGTATTGCAAAAGGAATTGGTTATTTGCACAGCAACGAAGCAAGCAAGCCCACAATAGTACACCAAAACGTTTCAGTTGAAAAGGTTATTCTAGACAATGAATTTAACCCCTTGATCATGGATGCTGGGCTCCCCAAGCTTCTTGCAGATGATGTAGTTTTCTCAGCTCTTAAAGCAAGTGCTGCCATGGGATACCTGGCACCAGAATATATTACTACTGGATGCTTTACTGAGAAGAGTGATATATACGCATTTGGGGTTATTGTCCTTCAACTTCTCTCTGGAAAGGCATTGATAGGGGGTTCAATCCGGGCGGCAGTTGAAGCTTTTAAATTTGAAGATTTTGTTGACACAAATCTGAAGGGAGATTATTCTAAATCTGAAGCTGCAATTCTTTCAAAGCTTGCAATTGGGTGCACCCATGAACTGCCAGAGCAAAGGCCAACCATGGTGGAGGTCATTGAAGAGCTGACCATGCTTTTTGTCCATTCATCATAA 2046 0.4189 MNFLHLLLLCLLVALSSSHLVRGNAELRALMDLKKSLDPEDTLLGSWTSDGDPCSGSFLGVACNQHNKVANISLPGRGLSGRVSPAVAELRCLSGLYLQFNRLSGDIPREIANLKELLDLYLNVNYLSGTIPPDIGNMTSLQVLQLGYNQLEGKIPKELGSLKQLNAMSLQHNKLTGQIPLTLGSLEKLKMLYLSSNNFNGIIPATLADIANLEVLDIQNNSLSGTVPSALKRLGEGFKGENNPDLCAVGFSTLKACNSDKILGIGQISSPNISLNNNPSVTLTNPANTHSQSNQIHCSKSRGFLHLVIAASVTTTIITFLSSGIFIFVRYRRQRERVRNTSDCSESQLSPYLPKDFYRSSSPLVNLENYYNGMDSPADGQNANGLSLEYLHRFRFNIDEIESATQHLSEANLLGKSKLSAVYKGVHRDGSLVAIRSISVTCCKTEEDEFLKGLILLTTLRHENIVKMKGFCYSRSRGEWYFVYDFATRGNLSQYLDKEDGSDSVLEWSKRVSIIRGIAKGIGYLHSNEASKPTIVHQNVSVEKVILDNEFNPLIMDAGLPKLLADDVVFSALKASAAMGYLAPEYITTGCFTEKSDIYAFGVIVLQLLSGKALIGGSIRAAVEAFKFEDFVDTNLKGDYSKSEAAILSKLAIGCTHELPEQRPTMVEVIEELTMLFVHSS* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2214 681 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Pvu3g2214 681 Gene3D Ribonuclease Inhibitor 173 246 IPR032675 -
Pvu3g2214 681 SUPERFAMILY Protein kinase-like (PK-like) 384 677 IPR011009 -
Pvu3g2214 681 SUPERFAMILY L domain-like 26 232 - -
Pvu3g2214 681 Gene3D Transferase(Phosphotransferase) domain 1 488 677 - -
Pvu3g2214 681 Gene3D Ribonuclease Inhibitor 23 172 IPR032675 -
Pvu3g2214 681 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Pvu3g2214 681 PANTHER OS01G0253100 PROTEIN 19 674 IPR045271 GO:0004714|GO:0006468
Pvu3g2214 681 PANTHER LEUCINE RICH REPEAT RECEPTOR KINASE 19 674 - -
Pvu3g2214 681 Gene3D Phosphorylase Kinase; domain 1 376 486 - -
Pvu3g2214 681 Pfam Protein tyrosine and serine/threonine kinase 412 673 IPR001245 GO:0004672|GO:0006468
Pvu3g2214 681 ProSiteProfiles Protein kinase domain profile. 408 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2214 Pvu-Chr3 43020879 43024307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2214 7 521 Miscellaneous Gene Families AT4G22730 53.143 2.83e-180 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pvu3g2214 PK_Tyr_Ser-Thr 8.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2214 - - gmx:100784155 1081.24