Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2209 ATGATTTTATCGCACATATATGTAATTAATAACTTGGGCAAGAAAGTGAGAGGGCTTTATATAAAGGTGGGTGGGGAGTGGGGCTTTTGGGTCATTACTCATTACAAGCTTGTGTTGCTTGGTAGTGCTGTTGTTTGTGTTAGTAGTATGGGGAGGCAACCCTGCTGTGACAAACTTGGGGTGAAGAAAGGTCCATGGACTGCAGAGGAAGACAAGAAGCTCATCAACTTCATTCTCACCAATGGTCAGTGTTGTTGGCGTGCTGTGCCAAAGCTTGCTGGCCTTAGGCGTTGTGGCAAGAGTTGTCGCCTTCGTTGGACTAATTATCTTCGCCCAGACTTGAAGAGAGGACTCCTAACAGAAGCAGAGGAGCAACTTGTTATTGATCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAAATTGCTGCCAGGTTACCCGGAAGAACAGACAACGAGATTAAAAATCATTGGAACACACATATCAAGAAAAAACTCCTTAAGATGGGTGTTGATCCCGTTACTCATGAACCTCTCAATAAACAAGCAGCATCTCAGGATAGTTCATCCTCCCCTTCCGAGCATTTGCCACAACCTGGAAATAACCTTGTTCAGGTGAAGGAAACTGATGGGGTTCTCAACTCAGAGGAGAATTCAAGTTCATCCCAAGCTGAAAATTCTTCTGGGGATGATTCACTTTTGCTAGAGAGCATTTGCAGTGACGATTCTCTATTAAACACCCTGTGGCTGGATGAAACTCCTCTGATGGAAGCACTATGGGACACAACACCCAAACTAGAGAATACTAGCAGTAACATGGGTTCGGTACCATCTTGGGAGGACAATTGTGGTTGGTTATTGGACTGTCAGGACTTCGGTATTCATGATTTTGGGTTTAACTGTTTCAACGAGATAGAGTCAAAGGCACTGCAAGCTCTAGAAATGAAGGACGAGGGGCATTAA 960 0.449 MILSHIYVINNLGKKVRGLYIKVGGEWGFWVITHYKLVLLGSAVVCVSSMGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGVDPVTHEPLNKQAASQDSSSSPSEHLPQPGNNLVQVKETDGVLNSEENSSSSQAENSSGDDSLLLESICSDDSLLNTLWLDETPLMEALWDTTPKLENTSSNMGSVPSWEDNCGWLLDCQDFGIHDFGFNCFNEIESKALQALEMKDEGH* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2209 319 ProSiteProfiles Myb-like domain profile. 111 161 IPR001005 -
Pvu3g2209 319 Gene3D - 120 193 - -
Pvu3g2209 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 110 IPR017930 -
Pvu3g2209 319 PANTHER PROTEIN ODORANT1-LIKE 51 304 - -
Pvu3g2209 319 ProSiteProfiles Myb-like domain profile. 58 110 IPR001005 -
Pvu3g2209 319 CDD SANT 120 161 IPR001005 -
Pvu3g2209 319 Gene3D - 61 116 - -
Pvu3g2209 319 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 51 304 - -
Pvu3g2209 319 SUPERFAMILY Homeodomain-like 60 157 IPR009057 -
Pvu3g2209 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 165 IPR017930 -
Pvu3g2209 319 CDD SANT 65 110 IPR001005 -
Pvu3g2209 319 MobiDBLite consensus disorder prediction 179 201 - -
Pvu3g2209 319 Pfam Myb-like DNA-binding domain 120 160 IPR001005 -
Pvu3g2209 319 Pfam Myb-like DNA-binding domain 63 110 IPR001005 -
Pvu3g2209 319 SMART sant 115 163 IPR001005 -
Pvu3g2209 319 SMART sant 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2209 Pvu-Chr3 42981027 42982797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2209 50 298 MYB Transcription Factor Family AT4G22680 60.902 4.60e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu3g2209 Myb_DNA-binding 3.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2209 K09422 - gmx:100786965 489.574