Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2199 ATGGCGTCCAATCAGGAGGAACCGGACATGGATCAACATCAAGACGGAGGAAAAACGGACCTCGGCACCAACCACGCCGACGCAGACAAACCCTCATCCCAACGCACTAACCTCAATGGACTTCCCCAACACTTCCAAGTCCTGCCGCTCAAAAACGAGCCAACGGATTCCGACCCTGACCCTGACCCTGACCCGGACCCAAACGCACCGATTCCTCCGCCGCCGCAGATGCAACTTTCGCTCAAATCGCCCAGGCGCTCCTCCACCAAGGACCGTCACACCAAAGTCGAAGGTCGTGGCCGCAGGATCCGAATACCCGCCACCTGCGCCGCCCGGATCTTCCAACTCACCCGAGAGCTGGGCCACAAATCCGACGGCGAAACTGTCCGGTGGCTCCTCGAGCACTCCGAGCAGGCCATCATAGAAGCCACCGGCACAGGCACGGTGCCGGCCATCGCGGTCTCCGTCGGCGGCGCGCTCAAAATCCCCACGACCTCGAGCGCCAACCAAAACAACGAGGGCGAGGAAGGCGCGTCTAACAAGAAACGGAAACGCCCTTCCAACAGCGAGTTCGTGGACGTAAACGATGCCGTTTCGCAGACGTCTGGTCTGGCCCCGGTTCAAGTACCCCAAGGACTGGTCCCGGTCTGGGCCGTAAGTAACCCCAGCATGGTGGTCCCCGCTAACACCTTCTGGATGATCCCGCAGGCCGCGACCACCAGCAACCCCTTGGGCGGAGTTACGGGCCCCGCCAGCCAACGGCCTCAGATATGGGCCTTATCTCCCTCCGTATTCAACGTGGCGGCTAGGCCCATATCGAGTCTGGTGACGACAACGAATATTCCAGAAGCTTGGCCCGTTATGACGGCCTGCAGTAACGGTTCTAACTTAGCAGCGGTGAGTACGAGCACGGTTGGGGCTAAAGTGGCTACTAATTCTAGCATGGCCCCTAGTGTTAGTTCCAGCGCCACCAAGACTCAGACGTTGCGGGATTTTTCCCTCCAAATTTACGATAAGCAAGAGTTGCAGTTCTTGGGCCGCTCTGGCACTCACGCCAATCCATGA 1065 0.5934 MASNQEEPDMDQHQDGGKTDLGTNHADADKPSSQRTNLNGLPQHFQVLPLKNEPTDSDPDPDPDPDPNAPIPPPPQMQLSLKSPRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHSEQAIIEATGTGTVPAIAVSVGGALKIPTTSSANQNNEGEEGASNKKRKRPSNSEFVDVNDAVSQTSGLAPVQVPQGLVPVWAVSNPSMVVPANTFWMIPQAATTSNPLGGVTGPASQRPQIWALSPSVFNVAARPISSLVTTTNIPEAWPVMTACSNGSNLAAVSTSTVGAKVATNSSMAPSVSSSATKTQTLRDFSLQIYDKQELQFLGRSGTHANP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2199 354 MobiDBLite consensus disorder prediction 163 188 - -
Pvu3g2199 354 MobiDBLite consensus disorder prediction 64 79 - -
Pvu3g2199 354 MobiDBLite consensus disorder prediction 8 25 - -
Pvu3g2199 354 MobiDBLite consensus disorder prediction 26 43 - -
Pvu3g2199 354 PANTHER TRANSCRIPTION FACTOR TCP9-LIKE 24 351 - -
Pvu3g2199 354 MobiDBLite consensus disorder prediction 1 102 - -
Pvu3g2199 354 ProSiteProfiles TCP domain profile. 89 143 IPR017887 -
Pvu3g2199 354 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 351 IPR005333 GO:0003700
Pvu3g2199 354 Pfam TCP family transcription factor 88 183 IPR017887 -
Pvu3g2199 354 MobiDBLite consensus disorder prediction 85 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2199 Pvu-Chr3 42863845 42865495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2199 72 351 TCP Transcription Factor Family AT2G45680 45.988 1.13e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pvu3g2199 TCP 7.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2199 - - gmx:100797827 458.373