Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2195 ATGGCTTTTACTGGTGCCAAACCTTTGTGTAATACTTCTCTAATACACACTTCAAAACATACCCCGAAACGTCCCCTTTTGCTCAAGGACTACCTCAGAGACGACCTCAGTTCCTGTTCATCCAACGGTTTTAAATCGTTGCCGCGCCGACAATGCTGCACCACCGTCGGATTCTTCGTGGAGAAAGATCCCCAACTCCAACGCAAAACAAGGAGCACACTCCCTCCACGGCGTCGACGACGATCATCCGTGTCGGTTCTGCAGAGAGCTTCCGTTGCCGTAATCAACGCGATAAAGTCGCTGCCGACGTCACACAAGAGTGGTAGAGCGAAGAGAGGTGTTAATACTACTGGCGTGCTCTGTAGAAGCCTCTCGAGGAAGCTGTTGAGTAGAAGCTTCTGGAGAAAAGCAGCAGCAGTGAGGGAAGAGGGAAGCCAAGGAGTGCCGCGGAGGAGGACATCTTTCCGCGAACTCATTATGCTGGATCAGGAACATCATAAAGCGACGTCGTTCAATGAATATACTGCATTAGCTGCCCCGAGCTTCACCACTTCTTCTGGCTGTGGCAGTAACAGCTGGGGAGAGAGTGAATTCACGTTTGCATCCTCTGAGAGCTCCAACGAAAACTACCTCCTGCTTGAGACCCCCAAAGATTGTGCACCACGACGTCACAAGGTGGAAGAAGAAGTAGTAACCAAGGAATATTGGACAAATGAGAAAGAACAGTTTAGTCCTGTATCGACACTAGATTGTCCATTTGTAGACGAAGAAGACATTTACAAGTGTCGTTTCAGATCCACTTCCACTTCCACTGTTGTTTCCTTCACAAAAGGAGGGAAACAGAAGCATATGCACAAAAGATGCCATTTAGAAAGTGTGGCTCCACTGGAGCCGGTGGTTTTAGAGAAAAGGTTCGCGCGGTTAGAGCTGGAGGATGAAACACTCAACCATTCTACAAAACAATACTCCCGCGTAATAGTGCCAGCAGCGCGTACTCTGAAGAACCTGCGTCATGCAAAGAATAACAACATTGAGGAGAATGCTCGAAGTCTTCTCAACTTCGTTAAAGGATCAAATCCAAACAACACTCTGATAATTAACGCAGAGAACCTGCTATTTGACTACTTCAAGAAGAGTATTGGAGAATGTAAAGGCCTTGATCTCTCAAAAAAGCTTCACCTTTGCAAGGTAGCAGAGGATTGGATAGATGGGCAGCCCCAAGAACTGTATTTGGATTGGGAAGAAGAAGGAGGAAGGTGCGTCTACGTTAGGGAGATGGAGAAGTGTGAAGAGTGGAAAAACTATGAACAAGAAATACAACAATTGGGCGAGGACCTGGCAAACGAATTCTTCACAAATCTGGTTAATGAGTCAGTACTTGATCTTATGACACGTACTAACCAATGA 1407 0.4662 MAFTGAKPLCNTSLIHTSKHTPKRPLLLKDYLRDDLSSCSSNGFKSLPRRQCCTTVGFFVEKDPQLQRKTRSTLPPRRRRRSSVSVLQRASVAVINAIKSLPTSHKSGRAKRGVNTTGVLCRSLSRKLLSRSFWRKAAAVREEGSQGVPRRRTSFRELIMLDQEHHKATSFNEYTALAAPSFTTSSGCGSNSWGESEFTFASSESSNENYLLLETPKDCAPRRHKVEEEVVTKEYWTNEKEQFSPVSTLDCPFVDEEDIYKCRFRSTSTSTVVSFTKGGKQKHMHKRCHLESVAPLEPVVLEKRFARLELEDETLNHSTKQYSRVIVPAARTLKNLRHAKNNNIEENARSLLNFVKGSNPNNTLIINAENLLFDYFKKSIGECKGLDLSKKLHLCKVAEDWIDGQPQELYLDWEEEGGRCVYVREMEKCEEWKNYEQEIQQLGEDLANEFFTNLVNESVLDLMTRTNQ* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2195 468 PANTHER OS04G0572500 PROTEIN 13 462 - -
Pvu3g2195 468 PANTHER OS04G0572500 PROTEIN 13 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2195 Pvu-Chr3 42810298 42813318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2195 24 462 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 27.105 2.09e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2195 - - var:108329219 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2195 3 42810298 42813318 Pvu3g2195 3 42810298 42813318 ECH