Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2188 ATGTTGGCTGGGTGTTCTAGTTCGACATTGTTGTCACCGAGCCACAGATTGAGGAGCGAAGCACCAGCACAGTTTCAAGCCTGCCATTTCCCGCGACCTTCCATGAGCACGCAGCGATTGGATTTGCCATGTTCTACCTTCACGCGCAAAGACAGCTCTTCACGTTCGCAGCCCCTCCTCAGGCCAGTGGGGCTTTCAGTGGAGAAACCCATAGAAGCCAAGACCAGCACTTGTTCTCTCAAGCACAACATTCGACTCCCACCCTTGGCCATCACAGCAGCAACACCATTGGTGGAAGAGTCCATCAAGGACAAGAGTTTGAAAAGGCTCGCGGAGCACGATGAGTCCTTCACCAACATAGCCAAGAGGAAAAAGGGTATCACTGAGTGTGACAATTCTGGTGATAACTTCTGGTTTCAGCCTGGCCTTGAGGGTAACACTTTAGGAGGGCTTAACAACACTTCACTTCCTTTCTCATCGGAGGAAGAGAGGGTTTGTTTTGTTCCTTCTGAAGTGGTGTCTCATTCTGCACCTTTTCCCTTGAACCCTTGGCTGGAATCATGTGTAACAAAGATCACCAACTTCGGTGAGGGTAGCCACCGTCCTCGCCAACATCACAACGACCATGGAGCAGAAGGGTCTGTCTCCAACGCTTCTTCAGAGAGCCAAAGCCTGAGGCTAAACGAGAACGCCTCAGAACATGAAGTGGGAAACGGTTCAGGAAATCCTTACCATCACCACGAGGTGGAGACAGGGGAAGAAGACGATCATCACGGGTTGGAACTCGTTAGCTTGCTCACTGGCTGCGTGGATGCTATTGGATCAAGAAACGTCGCTGCCATAAACCAGTTCATCGCAAAGCTGGGTGATCTTGCATCTCCAAGGGGAAACCCCATAAGCCGCATATGTGCTTATTTCACAGAGGCCTTGGCCATCAGAGTCACCAGGCTTTGGCCCCACGTTTTTCACATCACCACCAATTCCCGAGACATGGTGGAGGATGATGAAACCGGAACTGCATTGAGGCTTCTCAACCAGGTGACCCCAATTCCCAAGTTTATCCATTTCACATCAAACGAGATGCTGTTGAGGGCGTTTGAAGGAAAAGACAGGGTTCACATAATAGACTTTGACATCAAGCAAGGTCTCCAATGGCCAAGCTTGTTCCAGAGCCTAGCATCGAGAACAAACCCTCCGAGTCACGTGAGAATCACGGGGATAGGAGAGTCAAAGCAAGACCTAAACGAAACCGGAGACAGACTCGCAGGTTTCGCCGAAGCACTGAACCTCCCCTTCGAGTTCCACCCCGTTGTGGACAGACTCGAAGACGTGAGACTGTGGATGCTGCACGTGAAGGAGCAGGAAACGGTGGCAGTGAACTGCGTTTTGCAGCTGCACAAGACGCTTTACGACGGAAGCGGAGGAGCGTTGAGGGACTTCTTGGGGCTTATACGAAGCACCAATCCGAGCGTGGTTGTGGTGGCTGAACAAGAAGCAGAACACAACGAGACAAGGTTGGAAGCAAGGGTGTGCAACTCATTGAAGTACTACTCAGCATTGTTTGATTGTATCGAGGAGAGTGGGGTGGCGCAAGAGAGTGCAGTGAGGGTGAAGATAGAGGAGATGTACGGGAGGGAGATAAGGAACATGGTGGCATGTGAAGGGAGGGAGAGGTTGGAGAGGCACGAGGGTTTTGGGAAGTGGAGGAGGATGCTGGTGGAGGAAGGAGGGTTGCGATGTTTGGGAGTTTCTGAAAGGGAAATAAGTCAGAGCCAGTTGCTGTTGAAGATGTATTGTTGTGAGAATTACAGTGTGAAGAAGGTGGAGAAGGAAGGAGCAACAGCGGTTACTCTTAGTTGGCTTGATCAACCTTTGTATACTGTCTCAGCTTGGGTTCCTGTTGATGTTGCGGGTACCTCCTCCTCTTTTTCTCACCCAACTTGA 1944 0.5087 MLAGCSSSTLLSPSHRLRSEAPAQFQACHFPRPSMSTQRLDLPCSTFTRKDSSSRSQPLLRPVGLSVEKPIEAKTSTCSLKHNIRLPPLAITAATPLVEESIKDKSLKRLAEHDESFTNIAKRKKGITECDNSGDNFWFQPGLEGNTLGGLNNTSLPFSSEEERVCFVPSEVVSHSAPFPLNPWLESCVTKITNFGEGSHRPRQHHNDHGAEGSVSNASSESQSLRLNENASEHEVGNGSGNPYHHHEVETGEEDDHHGLELVSLLTGCVDAIGSRNVAAINQFIAKLGDLASPRGNPISRICAYFTEALAIRVTRLWPHVFHITTNSRDMVEDDETGTALRLLNQVTPIPKFIHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQDLNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEQETVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPSVVVVAEQEAEHNETRLEARVCNSLKYYSALFDCIEESGVAQESAVRVKIEEMYGREIRNMVACEGRERLERHEGFGKWRRMLVEEGGLRCLGVSEREISQSQLLLKMYCCENYSVKKVEKEGATAVTLSWLDQPLYTVSAWVPVDVAGTSSSFSHPT* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2188 647 MobiDBLite consensus disorder prediction 211 237 - -
Pvu3g2188 647 Pfam GRAS domain family 262 631 IPR005202 -
Pvu3g2188 647 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 636 IPR005202 -
Pvu3g2188 647 ProSiteProfiles GRAS family profile. 253 632 IPR005202 -
Pvu3g2188 647 PANTHER SCARECROW-LIKE PROTEIN 28 6 636 IPR030027 -
Pvu3g2188 647 MobiDBLite consensus disorder prediction 196 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2188 Pvu-Chr3 42719744 42722190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2188 1 632 GRAS Transcription Factor Family AT1G63100 57.310 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu3g2188 GRAS 2e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2188 - - gmx:100786173 1035.4