Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2184 ATGGGTAAGGCGTCAAAGTGGTTTCGCGGGCTTCTCGGTCTAAAAAAAACCGACCATAGTACCTCACCCACAAAGCCACCCAAAGAGAAACGTCGATGGAGCTTCGTTAAATCATACACAGAAAAGGACAACACCACCTCTGGTGCCACGTGTCCACAACAAGGTAGCAATGGAAACAAGCACGCCATGGCAGTGGCAGCAGCCACTGCTGCGGTGGCCGAAGCGGCGGTGGCTGCCGCGGAAGCGGCTGCCGTTGTTGTCAGACTAACGAGCAGCAGCGGTAGGTGTGCTGACGCGGGACCCACAAGGATTCGCCAACACTGGGCCGCCGTTAAGATCCAAGCCGCTTTTCGAGGCTGTTTGGCAAGGAGAGCACTGAGAGCATTAAAGGGGTTAGTGAAGCTTCAAGCATTAGTGAGAGGTCACATTGAGAGGAAGCGTACAGCGCAGTGGCTGAAAAGAGTGCAAGCACTCTTGCATGCACAGGCACAAGTCTCTGCAGGGTTGGCTCTGCATGCCTCACCTTCAAGTGCAAAGTTATCTAGCAACCTCCATGGTCCAGAAACACCCGAAAAATTTGAAAGCCCCATCAGTTCTAAGAGTATGAAGTATGAGCAATCACCTATACTCAAGAGAAATGGCTCCAAATCATGTGTCCAGATCAATGGCTATCAAGAGATATGTGGGAGTAGGTCGGAGAATCAAGTAACTGAAATATCATGGAACACAGCAAGATCATTGATAAGAACATACAGTTCCAATGATGAAAGAAATGACAGGGTTCTTGAAGTTGATTCTGGAAAACCACATTTTCCAAAGCGTAGAAACCTCTCTTACTCCACAGGTTCTGATCATTATAGTAAGAGTTTGAACAGCACTAAGGAGTCAACATCTCTTCAGTCTGGTCAAAGTCCATGTGGTGAAGTTCAGTCTTACAGTTACAGCTCACAAAAAGTCAACGAGGTTGAGGAGAGTCCGTTCTGCACTGCTGACAATAGTCCACAATTCTTATCAGCCACTTCTAAAGATGATGGCTTCAAAAGAAGCCCTTTTACTCCCACAAGGAGTGATGGCTCTAGAAGCTACATTCGTGGTTATCCTGACCACCCAAGTTACATGGGATGCACAGAGTCTTCAAAAGCAAAGGTCAGATCCCTGAGTGCCCCAAAACAAAGACCAAATTGTGAGAGGCCTGGTTCATCTAATAGATACTCACTTAATGGATTTGATATGTCAAGATCGACCACACAAAGGGCAATGCATGCAAGCTTCACCAACAAGGCATATCCAGGTTCTGGTCGTTTGGACAAGCTTGGTATGCCTGTGGGGTACAGATACTGA 1341 0.4743 MGKASKWFRGLLGLKKTDHSTSPTKPPKEKRRWSFVKSYTEKDNTTSGATCPQQGSNGNKHAMAVAAATAAVAEAAVAAAEAAAVVVRLTSSSGRCADAGPTRIRQHWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAQWLKRVQALLHAQAQVSAGLALHASPSSAKLSSNLHGPETPEKFESPISSKSMKYEQSPILKRNGSKSCVQINGYQEICGSRSENQVTEISWNTARSLIRTYSSNDERNDRVLEVDSGKPHFPKRRNLSYSTGSDHYSKSLNSTKESTSLQSGQSPCGEVQSYSYSSQKVNEVEESPFCTADNSPQFLSATSKDDGFKRSPFTPTRSDGSRSYIRGYPDHPSYMGCTESSKAKVRSLSAPKQRPNCERPGSSNRYSLNGFDMSRSTTQRAMHASFTNKAYPGSGRLDKLGMPVGYRY* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2184 446 MobiDBLite consensus disorder prediction 178 200 - -
Pvu3g2184 446 Pfam Protein of unknown function (DUF4005) 333 409 IPR025064 -
Pvu3g2184 446 Pfam IQ calmodulin-binding motif 107 127 IPR000048 GO:0005515
Pvu3g2184 446 Pfam IQ calmodulin-binding motif 133 147 IPR000048 GO:0005515
Pvu3g2184 446 Gene3D - 105 159 - -
Pvu3g2184 446 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
Pvu3g2184 446 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 441 - -
Pvu3g2184 446 MobiDBLite consensus disorder prediction 259 310 - -
Pvu3g2184 446 MobiDBLite consensus disorder prediction 383 406 - -
Pvu3g2184 446 ProSiteProfiles IQ motif profile. 130 157 IPR000048 GO:0005515
Pvu3g2184 446 MobiDBLite consensus disorder prediction 276 310 - -
Pvu3g2184 446 PANTHER IQ-DOMAIN 5-RELATED 1 441 - -
Pvu3g2184 446 MobiDBLite consensus disorder prediction 339 359 - -
Pvu3g2184 446 MobiDBLite consensus disorder prediction 339 362 - -
Pvu3g2184 446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 154 IPR027417 -
Pvu3g2184 446 SMART iq_5 105 127 IPR000048 GO:0005515
Pvu3g2184 446 SMART iq_5 128 149 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2184 Pvu-Chr3 42681825 42685387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2184 1 446 IQD Protein Family AT4G23060 41.491 1.03e-72 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2184 - - gmx:100793587 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2184 3 42681825 42685387 Pvu2g1595 2 29657311 29660559 PCT