Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2177 ATGGCGTCCTTGCAGCATCCCACAGCTTCCCTCCAATCCAAACACGTCCTAATCCCCGGAAAGCCCCTCGCCCAGAAACCCACTCACACCGTCTCCCTGCCCCGCTCCACCTTCTCCGCCCTCAAGCTCAAGCTCGCCGCCGCCACCCGCCGCTCCAACGGCGCCGCGGGCGCAAGAATGTCCGCCACGGCGGCCTCCAGCTACGCGTCGGCTCTGGCTGACGTGGCGAGCGCCAACAACACTTTGGACGCGACCACCTCCGACATCGAGAAAATCGACGAGCTGTTCTCGGACCCACGGGTGTCGGACTTCTTCGCGGACCCCACGCTGGAAGTGGAGAAGAAGCGGCAGGTGGTGGACGAGATCGCGGAGTCCTCGGGGTTCCAACCCCACACCAGAAACTTCCTGTACATCCTGGTGGACGCGCAGAGGATCGATCTCATTAATGAGATAGCGAAGGAGTTCGACCTGGTGTATAACAAGTTGACCGAAACGGAGTTGGCGGTGGTGACCTCGGTGGTGAAGTTGGAGTCCCAGCACCTGACGCAAATTGCGAAGCAGGTTCAGAAGCTGACTGGGGCCAAAAACGTGAGGATTAAGACCCTCCTTGACCCTAGTTTGGTGGCGGGTTTCACTGTGAGGTACGGCAATTCTGGCTCCAAGTTGATTGACATGAGCGTCAGGAAGCAGCTTGAGGACATTGCTGCTCAGCTTGAGTTGAGTGATCTCACACTCGCCGTATAA 744 0.5887 MASLQHPTASLQSKHVLIPGKPLAQKPTHTVSLPRSTFSALKLKLAAATRRSNGAAGARMSATAASSYASALADVASANNTLDATTSDIEKIDELFSDPRVSDFFADPTLEVEKKRQVVDEIAESSGFQPHTRNFLYILVDAQRIDLINEIAKEFDLVYNKLTETELAVVTSVVKLESQHLTQIAKQVQKLTGAKNVRIKTLLDPSLVAGFTVRYGNSGSKLIDMSVRKQLEDIAAQLELSDLTLAV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2177 247 Pfam ATP synthase delta (OSCP) subunit 65 238 IPR000711 GO:0015986|GO:0046933
Pvu3g2177 247 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 61 163 IPR026015 -
Pvu3g2177 247 Hamap ATP synthase subunit delta [atpD]. 60 240 IPR000711 GO:0015986|GO:0046933
Pvu3g2177 247 PANTHER BNACNNG66500D PROTEIN 46 246 - -
Pvu3g2177 247 PANTHER ATP SYNTHASE DELTA CHAIN 46 246 IPR000711 GO:0015986|GO:0046933
Pvu3g2177 247 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 197 216 IPR020781 GO:0015986|GO:0016020|GO:0046933
Pvu3g2177 247 Gene3D - 64 156 IPR026015 -
Pvu3g2177 247 PRINTS ATP synthase delta subunit signature 64 83 IPR000711 GO:0015986|GO:0046933
Pvu3g2177 247 PRINTS ATP synthase delta subunit signature 133 144 IPR000711 GO:0015986|GO:0046933
Pvu3g2177 247 PRINTS ATP synthase delta subunit signature 144 158 IPR000711 GO:0015986|GO:0046933
Pvu3g2177 247 PRINTS ATP synthase delta subunit signature 195 210 IPR000711 GO:0015986|GO:0046933
Pvu3g2177 247 PRINTS ATP synthase delta subunit signature 213 231 IPR000711 GO:0015986|GO:0046933
Pvu3g2177 247 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 65 238 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2177 1 246 Primary Pumps ATPases AT4G09650 61.753 1.51e-101 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2177 K02113 - gmx:100819224 358.992