Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2175 ATGGCACGATCCATTTCTCATGTCTTATTTTTACTTCTTATTTGCATTCTTCTGCAAGATCATATCCAAGCACTCAAACAGTCCTATATTGTATACTTAGGATCACATTCTCTTGGTCCAAATCCTTCTTCAGCTGTTCTTGAATCTGTCACAAACTCTCACTATGATTTACTTGGATCTTATGTGGGAAGCATCGAAAAGGCCAAGGAAGCAATCTTTTATTCTTATAATAGATATATTAATGGGTTTGCTGCAGTTCTTGATGAAGATGAAGCAGCTAATGTTGCAAAGAACCCAAATGTGATATCAGTTTTCTTAAACAAAGAACGAAAATTGCACACAACACACTCATGGAACTTCCTTGGGTTAGAAAGAAAAGGTGTGTTTCCACCTCACTCACTATGGTCGAAGACTGAGGGTGAAGATGTCATTATTGCAAATATAGATACAGGTGTTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGGTTTGGACCCATCCCAAAAAGGTGGCGCGGAATCTGTCAAAAGGGAGGTCATTTTAAATGCAACAGGAAGCTTATTGGAGCAAGGTTTTTTTACAAAGGGTATGAGGCAAGTGTTGGTAAAAAACTGAACGTGTCGATGCTTAGTGCACGCGACAATGAAGGTCATGGTTCACATACTTTATCAACAGCTGGTGGTAGCGTTGTTCCCGGAGCTAACATTTTTGGGTTTGGCAATGGAACTGCAAGAGGTGGATCACCAAAAGCTCGAGTTGCAACCTATAAGGCGTGCTGGGCTGAAGGATGTTTTGATGCAGATATTTTTGCTGCTTTTGAGGCTGCCATAAGTGATGGTGTAGATGTGATTTCCATGTCTTTGGGTTCAGATAATCCACCGGAGTTTTCTGAAAGTGCTATATCCATAGGGTCCTTCCATGCAGTTGCCCACGGCATAACTATAATGGCCTCTGCTGGCAATTCAGGACCTGTTCCTGGATCTGTATCCAACAATGAACCATGGACTCTCACAGTTGGAGCAAGCACAATGGATAGAGACTTCTTTAGTTACGTTGTACTTGGTAACAACAAAATCTTGAAGGGAGCTAGCCTTTCAGAGTTTAGCTTACCATCTAATAAGAAGTACCCATTGATCAGCAGTGCCGAAGCACTAACTAAATCTGCATCTTCTTCCGACGGCCCTTTTTGCTTGAACAACACTCTTGATGCTGGGAAGGTGAAGGGGAAGATATTGCTCTGTCTTCGCGGTATAAATGGTAGAGTAGAGAAGGGTATGGTAGCTGCCAGTTTAGGCGCTGTTGGGATGATTGTGGCTAATGATCAGCTAACAGGAAATGAAATTATATCCGACTCACATGTGCTTCCTGCTACACATGTTAACTACGAGAGTGGCAGATACATTTATAGTTACATCAACACTACCAAGTCTCCCATGGCTTATATTTCTAGACCGAAAACAGAACTGGGTATGAAGCCAGCTCCAGTTATGGCTGCATTTTCATCAAGGGGTCCCAATCTCCTCGACCAAGGAATCCTCAAGCCTGATATCACTGCACCAGGAGTCAACATCATTGCTGCTTATAGTGAACTCTCAGATTCCACAGCATCTAAGCAACCAATAACTCCTTACAATATGCTTTCTGGCACTTCAATGTCATGTCCTCATGTTGCTGGTGTTGTTGGGTTGCTGAAAGCCCTCCATCCTAATTGGAGCCCAGCTGCTATTAAGTCAGCAATCATTACCTCAGCAACTACAAAAGATAACTCTGGAAGGCGTATCCGGACTTCAGCACAGAACGAGTCAACACCATTTGACTTGGGTGGAGGCCACATTCGACCTAATCATGCTGCAGACCCTGGACTTGTATATGACCTAAATACTACTGATTATTTAAACTATTTGTGTGGTCGTGGCTACAACAGTTCCCAGCTGAAGTTGTTCTACAGCAGGCCTTACACTTGTCCGAAGTCATTCAGTTTAGCAGATTTCAATTACCCAACAATCACGATTCCTCGGATTAAATATGGACATTCTGTGAATGTTTCTCGAACTGTTACGAATGTTGGGTCCCCTAGCTTGTATAGAGTTCACATTGAGGCGCCACCAAAGGTTGCAGTTTGGGTTGAGCCTACCAAACTGAAGTTCGAGAAAAAGGGTGAGAAAAAGGAGTTCCGAGTTTCATTCACCTTGAAGTCCAAAACTGACAACACCACTGATTCCGTATATGGGTCGTTGACGTGGACTGATCACAAACACCGTGTTAGGAGTCCAATTGTTGTTAACTTCAATCCTTTGTAA 2301 0.4276 MARSISHVLFLLLICILLQDHIQALKQSYIVYLGSHSLGPNPSSAVLESVTNSHYDLLGSYVGSIEKAKEAIFYSYNRYINGFAAVLDEDEAANVAKNPNVISVFLNKERKLHTTHSWNFLGLERKGVFPPHSLWSKTEGEDVIIANIDTGVWPESKSFSDEGFGPIPKRWRGICQKGGHFKCNRKLIGARFFYKGYEASVGKKLNVSMLSARDNEGHGSHTLSTAGGSVVPGANIFGFGNGTARGGSPKARVATYKACWAEGCFDADIFAAFEAAISDGVDVISMSLGSDNPPEFSESAISIGSFHAVAHGITIMASAGNSGPVPGSVSNNEPWTLTVGASTMDRDFFSYVVLGNNKILKGASLSEFSLPSNKKYPLISSAEALTKSASSSDGPFCLNNTLDAGKVKGKILLCLRGINGRVEKGMVAASLGAVGMIVANDQLTGNEIISDSHVLPATHVNYESGRYIYSYINTTKSPMAYISRPKTELGMKPAPVMAAFSSRGPNLLDQGILKPDITAPGVNIIAAYSELSDSTASKQPITPYNMLSGTSMSCPHVAGVVGLLKALHPNWSPAAIKSAIITSATTKDNSGRRIRTSAQNESTPFDLGGGHIRPNHAADPGLVYDLNTTDYLNYLCGRGYNSSQLKLFYSRPYTCPKSFSLADFNYPTITIPRIKYGHSVNVSRTVTNVGSPSLYRVHIEAPPKVAVWVEPTKLKFEKKGEKKEFRVSFTLKSKTDNTTDSVYGSLTWTDHKHRVRSPIVVNFNPL* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2175 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Pvu3g2175 766 SUPERFAMILY PA domain 406 474 IPR046450 -
Pvu3g2175 766 Pfam PA domain 393 466 IPR003137 -
Pvu3g2175 766 Pfam Fibronectin type-III domain 663 761 IPR041469 -
Pvu3g2175 766 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Pvu3g2175 766 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Pvu3g2175 766 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Pvu3g2175 766 PANTHER PEPTIDASE S8 12 762 - -
Pvu3g2175 766 Gene3D Peptidase S8/S53 domain 142 631 IPR036852 GO:0004252|GO:0006508
Pvu3g2175 766 Pfam Subtilase family 140 587 IPR000209 GO:0006508|GO:0008236
Pvu3g2175 766 CDD Peptidases_S8_3 111 585 IPR034197 -
Pvu3g2175 766 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Pvu3g2175 766 Gene3D - 635 763 - -
Pvu3g2175 766 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 12 762 - -
Pvu3g2175 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 113 IPR037045 -
Pvu3g2175 766 ProSiteProfiles Serine proteases, subtilase domain profile. 117 618 - -
Pvu3g2175 766 Gene3D - 345 489 - -
Pvu3g2175 766 SUPERFAMILY Subtilisin-like 112 622 IPR036852 GO:0004252|GO:0006508
Pvu3g2175 766 CDD PA_subtilisin_like 351 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2175 Pvu-Chr3 42596516 42600596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2175 24 764 Subtilisin-like Serine Gene Family AT5G59810 56.876 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2175 - - vun:114175516 1249.57