Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2173 ATGGCCACCACCAGTCTTGGCGGCGGCGCCGGCGGAGATGACCGCGTCCTGGCCACGGCTCAGCAGATCGTGAAGAGCCTCAGAGCCGCCAAAGAGGATCGCGAAGACATGCTTCTGATCTTCTCCACCTTCGATAACCGACTCTCCGGCATCTCCGACCTAATAAACGGCGACGATTCCAAATCCTCCGAAGAGGAAGAACTCGACCGCTTCGAAGCCGCGGAGAAAGTGATTCTCGCCGACGCATCCCTCTCCGACGAGCCTTCGCGCCAATCCACGTCTCTCTTTAAGCCTCCGAATAATCCAGCGGAGTACTTTTCAGCGGTTGACGAGATCATCCACTGGATGGAGCAGTTCTCGATCGCGCCACCGTCCTCTGCCGTGGGACGCACGGGGCCGGTTATCGCGGACCGGGCGGAGAACGCGATTCAGCTCGCGATGTCGCGACTGGAGGACGAGCTGCGCCACGTGCTGATTTGCAATACGATCCCGCTCGACGCCGTGAGTCGCTACGGTTCGATCAGGAGGGTTTCGCTCTCGTTCAGTTCGCACGACGGCGCTATCGACGATACCCTAGAGAGCTTCGGTGAGGTCGGCTCGAGCCGCTTCCACGAGCGAGGCGCGAGCCTCGGCGACGATTTGTTCGTCGACTTGGTGCGTCCCGAGGCGGTTCAGGACCTCAGGGAAATTATCGATCGCATGGTTAGGTCTGGTTATGAGAGAGAGTGTCTTCAGGTTTATAGCAGTGTCCGTCGCGACGCCTTGGATGAGTGTTTGGTCACTCTGGGTGTTGAGCGGTTGAGTATTGAAGAGGTTCAGAGGGTTGAGTGGAGGAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTGAAGGTTCTTGTTGGGGTTTTGTTGAGTGGTGAGAAGAGGCTGTGTGATGGTTTGTTTGGGGATTTGGATGATTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGGTGTGTTATGCAGTTGCTGAATTTCGGCGAAGCTATTTCAATTTGTAAGCGCTCGCCGGAGAAGTTGTTTCGGATTTTGGACATGTATGAAGCTTTGAGGGATGCCATGCCTGATTTGCAGGCCATGGTTTCGGATGAGTTTGTGATTGGTGAGGCATACGGAGTGCTGAGTGGGCTTGGTGAGGCTGCCAAGGGGACTTTTGCTGAATTTGAAAATTGTATTAGGAATGAAACTTCCAAAAAGCCAGTCATAACTGGGGATGTTCACCCCTTGCCTCGTTATGTCATGAATTACCTCAAGTTGCTTGTGGATTATGGTGACCCTATGGATTCGCTTCTGGAGATTAGTGAGGAGGATCTCTATCGATTTAAAAATGATCTTGGTGGTGATGTTTCGCAGTTGGAGGCCATGTCACCCTTGGGGCAGCGGATTCTGTTGCTCATATCTGAGCTTGAGTATAATCTTGAGGAGAAATCGAGGCTTTATGAAGATAGTGCTATGCAGCAGGTGTTTTTGATGAACAATCTGTATTACTTAGTGCGGAAAGTGAAGGACTCGGATCTTGGGAAGGTCTTGGGGGATAATTGGATTCGGAAACGACGTGGTCAGATACGGCAGTATGCTACAGGGTATCTCAGAGCCTCTTGGAGCAGGGCCTTGTCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCATCCAAGGTGACTTTGAAGGAGAGATTCAAAAGCTTCAATGCCTGTTTTGAAGAAATTTATAGGGTCCAGACAGCTTGGAAGGTACCGGACGATCAGCTTCGCGAGGAGCTGCGGATATCTATATCGGAGAAGGTGATTCCTGCATATCGCTCTTTTGTGGGTAGGTTTGGGAGTCAGTTAGCGGGAAGACATTCGGTGAAATACATAAAGTATACAGCAGAGGATTTAGAGACCTATCTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATTACATAAGGAGGAAAAGTACATAG 1986 0.507 MATTSLGGGAGGDDRVLATAQQIVKSLRAAKEDREDMLLIFSTFDNRLSGISDLINGDDSKSSEEEELDRFEAAEKVILADASLSDEPSRQSTSLFKPPNNPAEYFSAVDEIIHWMEQFSIAPPSSAVGRTGPVIADRAENAIQLAMSRLEDELRHVLICNTIPLDAVSRYGSIRRVSLSFSSHDGAIDDTLESFGEVGSSRFHERGASLGDDLFVDLVRPEAVQDLREIIDRMVRSGYERECLQVYSSVRRDALDECLVTLGVERLSIEEVQRVEWRSLDEKMKNWVQAVKVLVGVLLSGEKRLCDGLFGDLDDLKEICFNETAKGCVMQLLNFGEAISICKRSPEKLFRILDMYEALRDAMPDLQAMVSDEFVIGEAYGVLSGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLPRYVMNYLKLLVDYGDPMDSLLEISEEDLYRFKNDLGGDVSQLEAMSPLGQRILLLISELEYNLEEKSRLYEDSAMQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQIRQYATGYLRASWSRALSCLKDEGIGGSSNNASKVTLKERFKSFNACFEEIYRVQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFGSQLAGRHSVKYIKYTAEDLETYLLDLFEGSPAVLHYIRRKST* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2173 661 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 56 660 - -
Pvu3g2173 661 PANTHER EXOCYST COMPLEX PROTEIN EXO70 56 660 IPR004140 GO:0000145|GO:0006887
Pvu3g2173 661 Gene3D Exocyst complex component Exo70 88 653 - -
Pvu3g2173 661 SUPERFAMILY Cullin repeat-like 89 647 IPR016159 -
Pvu3g2173 661 Pfam Exo70 exocyst complex subunit 285 643 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2173 Pvu-Chr3 42568436 42571125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2173 14 660 EXO70 exocyst subunit family AT5G50380 58.850 0.0 758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2173 3 42568436 42571125 Pvu3g2173 3 42568436 42571125 ECH
Pvu9g1672 9 23557877 23563227 Pvu3g2173 3 42568436 42571125 PCT