Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2167 ATGGTCATAGAGGTTTCCTCCGGTTCCCACTTCTCCGGTTGGCACCCTTCAACGACGTCTTCTTCTTCTTCTTCATCATCTTCTCACCCTCCCTTCATCATTGGTGTCGCTGGAGGCACTGCATCGGGGAAAACCACTGTGTGCGACATTATCATTCAGCAGCTGAAAGATCACAGAGTTGTGCTCCTCTGTCAGGATTCATTCTACCGCGGTTTGACGAATGATGAGTTGCAACGCGTTCATGAGTATAACTTTGATCATCCTAATGCATTTGACACAGAGCAACTAGTAGAAACCCTCGCTCAGCTTAAATCTGGACAGTCTGTTCAGATTCCAATATATGATTTCAAGCTTCATCAGAGATCTACCGACAGATCCCGACAGGTCAATGCATCTGATGTAATCATTATGGAGGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGAATATGAAGATATTTGTTGATGGAGATCCGGATGTGAGGCTTGCCCGCAGAATAAAACGTGATACAGTTGAGAGGGGTAGAGATGTACAATCGGTACTGGAACAGTATGCAAAATTTGTTAAGCCTGCTTATGAAGATTTTATTCTTCCATCCAAAAAATATGCTGACATCATAATACCTCGCGGGGGAGAGAATCGTGTAGCAATTGACTTGATTGTTCAACATATCCGTACTAAGCTTGGCCAACATAACCTCTGCAAAATATATCCGAATTTGAATGTTCTAAAATCTACTTTCCAGACCAGAGGCATGCACACTCTTATTCGTGATAGGGACATATCAAAGCATGATTTTGCTTTTTATTCAGATCGGCTAATTCGCTTGGTAGTGGAACACGGTCTTGGTTACTTGCCATTTACAGAAAAACAAGTTATCACACCTACAGGCTCGATTTATACTGGAGTTGATTTTTGTAAGAAATTGTGCGGCGTATCCATTGTTCGAAGTGGCGAAAGTATGGAAAATGCCTTGCGTGCTTGCTGTAAAGGAATAAAGATCGGAAAAATTCTGATTCACCGCGATGGTGATGAAACCCAGCTTATTTATGAGAAGCTTCCTAGAGATATTTCGGAGAGACATGTTCTTCTCATGGACCCAGTACTTGGTACAGGTAACACTGCGAGCGAAGCAATCGAGCTTCTCATAAAGAAGGGAGTTCCAGAGTCCCAGATAATATTCCTTAACCTCATTTCTGCTCCTGAGGGAATACAATGTGTATGTAAACGTTTTCCGCATCTGAAAATTGTCACATCGGAGATCGAAGCAGGATTAAATGACCAGTTCCAGGTTATACCAGGGTTGGGAGAATTTGGAGACCGCTACTTTGGTACGGACGATTTGTAG 1359 0.426 MVIEVSSGSHFSGWHPSTTSSSSSSSSSHPPFIIGVAGGTASGKTTVCDIIIQQLKDHRVVLLCQDSFYRGLTNDELQRVHEYNFDHPNAFDTEQLVETLAQLKSGQSVQIPIYDFKLHQRSTDRSRQVNASDVIIMEGILVFHEQRVRNMMNMKIFVDGDPDVRLARRIKRDTVERGRDVQSVLEQYAKFVKPAYEDFILPSKKYADIIIPRGGENRVAIDLIVQHIRTKLGQHNLCKIYPNLNVLKSTFQTRGMHTLIRDRDISKHDFAFYSDRLIRLVVEHGLGYLPFTEKQVITPTGSIYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDETQLIYEKLPRDISERHVLLMDPVLGTGNTASEAIELLIKKGVPESQIIFLNLISAPEGIQCVCKRFPHLKIVTSEIEAGLNDQFQVIPGLGEFGDRYFGTDDL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2167 452 Gene3D - 235 449 IPR029057 -
Pvu3g2167 452 TIGRFAM udk: uridine kinase 31 231 IPR000764 -
Pvu3g2167 452 CDD UMPK 33 231 IPR000764 -
Pvu3g2167 452 Gene3D - 27 234 IPR027417 -
Pvu3g2167 452 PANTHER URIDINE KINASE 11 448 - -
Pvu3g2167 452 CDD PRTases_typeI 308 422 IPR000836 -
Pvu3g2167 452 PRINTS Uridine kinase signature 31 48 - -
Pvu3g2167 452 PRINTS Uridine kinase signature 61 72 - -
Pvu3g2167 452 PRINTS Uridine kinase signature 106 121 - -
Pvu3g2167 452 PRINTS Uridine kinase signature 163 173 - -
Pvu3g2167 452 PRINTS Uridine kinase signature 177 188 - -
Pvu3g2167 452 PRINTS Uridine kinase signature 199 212 - -
Pvu3g2167 452 PANTHER URIDINE KINASE 11 448 - -
Pvu3g2167 452 Pfam Phosphoribulokinase / Uridine kinase family 33 219 IPR006083 GO:0005524|GO:0016301
Pvu3g2167 452 Pfam Uracil phosphoribosyltransferase 249 449 - -
Pvu3g2167 452 ProSiteProfiles UvrC family, homology region profile. 119 220 IPR001162 GO:0009381
Pvu3g2167 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 224 IPR027417 -
Pvu3g2167 452 SUPERFAMILY PRTase-like 234 450 IPR029057 -
Pvu3g2167 452 MobiDBLite consensus disorder prediction 10 29 - -
Pvu3g2167 452 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2167 Pvu-Chr3 42494590 42500121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2167 2 451 PRT Gene Family AT3G27190 74.630 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2167 K00876 - gmx:100816209 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2167 3 42494590 42500121 Pvu3g2167 3 42494590 42500121 ECH