Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2152 ATGGCCCCTACCCATTGTAGTCCCTTCAACGGAGAAATCGATGGTGAAAACCTATCTCACGTGTTTGATATCTGGGCAACCGATCACTATCCCTATTTTCCTCATCAACCTATTTCCAAGAGTAGCAGTTCTACCTTAGTTCTCCCCTTTTGTGACGGAACCATAAGGGATAACAAAAGGGTGAAGAGAACGGTGGGAATCCCCTTTGATTGGATAGAAAATTTGATCGGAAACTCCCATAGTTTCCTCAACACCAGCGCCAACAACATCAGCAATAGGAATAGGGATAGTATACCAAAGCTTCATTTCAGAGATCACATACGGACTTACACTCAAAGATATCTGGCAGCGGAACCAGAAGAAGAGGCACCAGAAGATACAAATAGTTCAGAAGGTGGTGGGGTTGAAGAAGATGGTTGTCACGACGGAGTGAGGCTGGTTCAACTTCTAATAGCATGTGCAGAAGCAGTGGCTTGTCGAGATAAATCGCACGCTTCAATATTACTATCAGAACTGAGAGCCAACGCTTTAGTATTCGGATCTTCGTTTCAGAGAGTTGCTTCTTGTTTTGTTCAAGGACTAACGGAGAGGCTGAATCTGATTCAGCCCACCGGGCCCGTGAGCCCGATGCCAGCCATGATGAACATTATGGACACAGCCTCGGAAGAAATGGAGGAAGCATTCAGATTGGTTTACGAGCTGTGTCCACACATCCAGTTCGGGCACTTTGTCACTAATTCCATAGTATTGGAAGCCTTTGTGGGTGAGAGTTTTGTCCATGTCGTGGATCTCGGCATGACTCTGGGTTTACGACATGGACACCAATGGAGAGGACTGATGCAGAGCCTCGCCAATCGCAAGGCCGACGAACGTGTTCGTCGTCTGCGAATCACGGCAGTGGGACTCTGCGACAGACTTCAATCCATTGGTGACGAACTCTCAGTGTATGCAACTAATTTGGGCATCAACTTCGAGTTCTCAGTGGTGAAAAAGAATTTGGAAAATTTGGAACCTGAGGACATAGAAGTGAGGGAAGAAGAGGTTCTTGCGGTGAACAGCATTCTGCAGCTGCACTGCGTGGTGAAGGAAAGCCGAGGGGCTTTGAATTCAGTGCTGCAGATGGTTCACGGGCTTGGTCCGAAAGTGTTGGTGATGATGGAGCAGGACTCGAGTCACAACGGACCCTTTTTTCTCGGGAGATTTATGGAATCATTGCACTATTATTCTGCCATATTCGACTCCTTGGATGTTATGTTGCCCAAGTATGACACCAAGAGAGCGAAGATGGAGCAGTTTTATTTCGCTGAGGAGATAAAGAACATAGTCAGCCGTGAGGGGCCGTTGAGGATGGAGAGACACGAGAGAGTTGATCAGTGGCGGAGGAGGATGAGCAGGGCGGGGTTTCAGGCTGCGCCGATTAAGATGGTGGCTCAGGCGAAGCAGTGGCTTCAGAATAGCAAGGTGTGTGAAGGGTACACGGTGGTGGAAGAGAAAGGGTGTTTGGTTCTTGGATGGAAATCGAAGCCTATTGTGGCGGTTTCTTGCTGGAAATGCTGA 1557 0.4811 MAPTHCSPFNGEIDGENLSHVFDIWATDHYPYFPHQPISKSSSSTLVLPFCDGTIRDNKRVKRTVGIPFDWIENLIGNSHSFLNTSANNISNRNRDSIPKLHFRDHIRTYTQRYLAAEPEEEAPEDTNSSEGGGVEEDGCHDGVRLVQLLIACAEAVACRDKSHASILLSELRANALVFGSSFQRVASCFVQGLTERLNLIQPTGPVSPMPAMMNIMDTASEEMEEAFRLVYELCPHIQFGHFVTNSIVLEAFVGESFVHVVDLGMTLGLRHGHQWRGLMQSLANRKADERVRRLRITAVGLCDRLQSIGDELSVYATNLGINFEFSVVKKNLENLEPEDIEVREEEVLAVNSILQLHCVVKESRGALNSVLQMVHGLGPKVLVMMEQDSSHNGPFFLGRFMESLHYYSAIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSREGPLRMERHERVDQWRRRMSRAGFQAAPIKMVAQAKQWLQNSKVCEGYTVVEEKGCLVLGWKSKPIVAVSCWKC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2152 518 PANTHER DELLA PROTEIN RGL1-LIKE 73 517 - -
Pvu3g2152 518 Pfam GRAS domain family 146 517 IPR005202 -
Pvu3g2152 518 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 73 517 IPR005202 -
Pvu3g2152 518 ProSiteProfiles GRAS family profile. 137 517 IPR005202 -
Pvu3g2152 518 MobiDBLite consensus disorder prediction 116 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2152 Pvu-Chr3 42305333 42307097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2152 138 517 GRAS Transcription Factor Family AT1G14920 37.949 8.38e-74 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu3g2152 GRAS 6.9e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2152 - - gmx:100813548 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2152 3 42305333 42307097 Pvu3g2152 3 42305333 42307097 ECH