Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2128 ATGGAGATGGAACGCGTCTTCGAATTTCCTCACTCTCACATGGATCGGCGACCGAGAAAGAGAGCGAGGTTGGGCTGGGACATTCCTGAGGTCCCTAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGGGGCTATTTCAAGCTATGCTCCTTCAAGGGGTCCCTCAGAACATACCACTTGTTCCCTATTTGTTAAGGCTGTTGCTCAAAATGGTTCTCCCCCTTGGCGAGATGATGACAAAGATGGACATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATCCATAGCAAAATGGGCGAAGGAACTTTTGGGCAGGTCTTAGAATGCTGGGACCGAGAAAGGAAGGAAATGGTTGCAATTAAAATTGTTCGTGGGATAAAGAAGTATCGAGAAGCAGCCATGATAGAAATTGAGGTGTTGCAGCAGCTTGGTAAACATGACAAAGGGGGCAATCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGCGAGATTGGCAGACAACTATTGGAATGTATAGCATTCATGCATGATTTGCGTATGATTCATACTGATCTGAAGCCTGAAAACATATTACTAGTTTCACCAGAGTATGTCAAAGTGCCTGACTACAAGAGTTCATCTAGATCACCAAGTACCTATTTCAAGAGGGTTCCCAAATCTAGTGCCATAAAGGTTATTGATTTTGGCAGCACCACTTACGAGCGAGAAGATCAGACTTACATTGTATCAACTCGTCATTATAGAGCTCCTGAAGTTATCCTCGGACTTGGCTGGAGCTATCCATGTGATATATGGAGTGTAGGATGTATATTGGTTGAATTATGCACGGGCGAAGCTTTATTTCAGACTCATGAAAATTTAGAACATCTTGCTATGATGGAAAGGGTACTTGGCCCTTTACCACAGCACATGTTGAAGAGAGTCGACCGAAATGCCGACAAGTATGTTAGGAGGGGTAGATTAGACTGGCCCGAGGGTGCAACCTCGAGGGAGAGTATCAAAGCTGTAATGAAGCTTCCTAGGCTTCAGAACCTTGTAATGCAACATGTAGATCATTCAGCAGGCGATCTCATACATCTGTTGCAGGGATTACTTAGATTTGATCCCTCTGAAAGACTTACAGCCAAGGAAGCCCTTAGATATCCCTTCTTTATGAGAGATCACTTTAGGAGATAA 1293 0.4316 MEMERVFEFPHSHMDRRPRKRARLGWDIPEVPKAQVGLFCGQDVGAISSYAPSRGPSEHTTCSLFVKAVAQNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSTYFKRVPKSSAIKVIDFGSTTYEREDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRNADKYVRRGRLDWPEGATSRESIKAVMKLPRLQNLVMQHVDHSAGDLIHLLQGLLRFDPSERLTAKEALRYPFFMRDHFRR* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2128 430 Gene3D Phosphorylase Kinase; domain 1 85 178 - -
Pvu3g2128 430 Gene3D Transferase(Phosphotransferase) domain 1 152 423 - -
Pvu3g2128 430 SUPERFAMILY Protein kinase-like (PK-like) 85 427 IPR011009 -
Pvu3g2128 430 SMART serkin_6 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2128 430 CDD PKc_CLK 85 423 - -
Pvu3g2128 430 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 430 - -
Pvu3g2128 430 PANTHER KINASE AFC1 1 430 - -
Pvu3g2128 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Pvu3g2128 430 ProSiteProfiles Protein kinase domain profile. 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2128 430 Pfam Protein kinase domain 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2128 Pvu-Chr3 42063637 42067744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2128 103 423 Core Cell Cycle Gene Families AT1G76540 25.602 3.82e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pvu3g2128 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2128 K08287 - gmx:100804452 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2128 3 42063637 42067744 Pvu3g2128 3 42063637 42067744 ECH