Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2112 ATGGGATCTAAACTCCTGCATAATAATACTATTAAGTTCCTCTGCAGCTACGGCGGCAAGATTCTTCCTCGCCGCACTGACGGCATCCTCCGATACTACGGCGGCCACACCAGAGTCCTCGCTCTCCATCCTTCCACTTCATTCTCGGAGATGATGGTAAAGATTAGCGAGCTGTGCGGTTCGCCGGCGACACTCCGGTGTCCATTGCCGAATGGAGACTTGGACACCTTGATTTCTGTCAAAAACGACGAAGATTTGGCGAATATAATCGAGGTATACGATCGAGCTTCTTCGTTCTTACCTCATCGGTTGAAGATCAGAGCCATTCTTTTGCCGCTAAACATATCCTCTCCTTCTCCGTCTTCTTCGTCCAGCGCCTCTCACACTCCGACCGATTCGCCTCACTCCTCCGCCAGTTCCCCGCCGCGTTCTGAGGCTCACCGGTTTGGCTGCCGGAATTGCTCGCCAACTGCGTATTCTATAGGCCTCCGTAATGGAGCGGCAAAATCCGGCTCGCCTCACTCCTACCCCGGTTCCCCGCCGTGCCCCGCGGTGCACCGGTTCGGTTGCCGGAATTGTTCCGCGGCTGCGTATCTTACTGGCGTCGATAACGGAGCGGCAAAATCCGCCGTACTCCGTGGCCCACCGGTTCGGCTGCCAGAATTGGTCGCTGATTCGGTAGTCTATTGGCGTTGGTAA 699 0.5551 MGSKLLHNNTIKFLCSYGGKILPRRTDGILRYYGGHTRVLALHPSTSFSEMMVKISELCGSPATLRCPLPNGDLDTLISVKNDEDLANIIEVYDRASSFLPHRLKIRAILLPLNISSPSPSSSSSASHTPTDSPHSSASSPPRSEAHRFGCRNCSPTAYSIGLRNGAAKSGSPHSYPGSPPCPAVHRFGCRNCSAAAYLTGVDNGAAKSAVLRGPPVRLPELVADSVVYWRW* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2112 232 CDD PB1_UP2 14 110 - -
Pvu3g2112 232 Pfam PB1 domain 30 97 IPR000270 GO:0005515
Pvu3g2112 232 MobiDBLite consensus disorder prediction 118 148 - -
Pvu3g2112 232 MobiDBLite consensus disorder prediction 118 143 - -
Pvu3g2112 232 SUPERFAMILY CAD & PB1 domains 27 110 - -
Pvu3g2112 232 SMART PB1_new 25 111 IPR000270 GO:0005515
Pvu3g2112 232 PANTHER PB1 DOMAIN PROTEIN 8 169 - -
Pvu3g2112 232 PANTHER OS05G0427100 PROTEIN-RELATED 8 169 - -
Pvu3g2112 232 Gene3D - 30 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2112 Pvu-Chr3 41954360 41955579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2112 11 120 MAP Kinase Kinase Kinase AT1G04700 45.455 8.90e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2112 - - vun:114177582 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2112 3 41954360 41955579 Pvu3g2112 3 41954360 41955579 ECH
Pvu3g2112 3 41954360 41955579 Pvu9g1803 9 25356687 25357655 PCT