Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2111 ATGTCTCCTTCCAAAATCCCCGTCGCCGGTGAATTTTCATTTTCCGGCATGTGGTTGGTTATTCTTCTTCTTCATCTCGCTCTCTTTGCGACGCCTTCACTTTGCTTGGACTTCCTATTCAACTCCTTCACCGGCATCACCAACCTCACTCTGGTGAAAGACGCTCGCGTCGACGCCTCGGTGATCCGCATGACCAACGACTCTAACCAGTACTCTTACGGCCGCGCCTTCTATCCCACAAAAGTTCCCATCACAAAGCCGTCTTCCAATTCCTCATCCTCTTCCATTACTTCATTCTCCACCTCTTTTGTCTTCTCCGTCTTGCCGGAAATTACTACCAGTCCCGGCTTTGGCCTCGCCTTCGTCCTCTGCAACACCACCGATCCTCCCGGAGCCATCGCCAGCCAGTACTTCGGTCTATTCACCAACGCCACCTCCCCCACCCTTTTCCCCCTGGTCGCCGTCGAATTCGACACCGGCCAGAACCCTGAGTTCAACGACATCAACGACAACCACATCGGCATCGACCTCAACAACATCGAATCCACCATCGCCACCCCCGCCGGCTACTACAATTCCACCGGGGGATTCGTGCCAGTGCGCATGCGCACCGGCCAGAATATCCGAGCCTGGATCAATTTTGACGGCCACAATCTGCTGTTCAACGTAACGGTCGCGCCAATCGGCGTTTCGCGCCCGTTGAAGCCTACGCTTTCACATTATGTTCCCACCATAGGTAACTACGTGTCAGCTGAGATGTACGTCGGGTTTTCCGCTTCCAAAACGAACTGGATCGAGGCGCAGAGGGTTCTGGCGTGGAGCTTCAGCGATTCAGGGCCAGCGAGGGAGCTGAACACAACAAACTTACCGGTGTTCGAACCGGAACCATCGTCTTCCTCGCTTTCTGGTGGCGCAATAGCGGGGATTGTTGTTGGTTGTGTTGTTTTTGTGGTTATATGCGGTTGTGGATTTTACTTGTGGTGGCGAATCCAGAAAGGGAAAGACGAAGAAGACGATGAGATCGAAGATTGGGAGTTGGAGTACTGGCCGCATAGATTCTCGTACGAGGAATTGAGTTCTGCGACAGGGGAATTTGGGAAGGAGCAGCTCTTAGGTTCAGGAGGGTTCGGGAGAGTGTACAAAGGGACGTTGCCGAACAAGACACAGATGGCGGTGAAGTGTGTGAACCACGATTCGAAGCAAGGGTTGCGGGAATTCATGGCGGAGATATCGAGTATGGGGAGGCTTCAACACAAGAACCTGGTTCAAATGCGAGGCTGGTGTAGAAAGGGTAACGAGCTTATGCTTGTTTATGATTACATGCCCAATGGGAGTCTGAACAGGTGGGTTTTCGATCGCCCCGAGAAGCTTCTAGGCTGGGAGCAACGCCGTCGTATCCTTGTCGACGTGGCAGAGGGGCTTACCTACCTTCACCACGGTTGGGACCAGGTTGTTATCCACCGAGATATTAAGTCCAGTAACATATTGTTGGACGCCGACATGCGAGGGAGACTCGGGGACTTTGGTTTGGCCAAGCTTTACACGCACGGGGAAGTTCCCAATACCACACGTGTGGTGGGGACGTTGGGCTACTTGGCGCCGGAGCTAGCCACGGTTGCGGCGCCGACGTCCGCGAGTGACGTCTACAGCTTTGGGGTGGTGCTGTTGGAGGTGGCGTGCGGGAGGCGGCCCATTGAGACTTCGGTGGTGGAGGAGGAGGTGGTGCTCATTGATTGGGTGAGGGAGTTGTACGCGAAGGGGTGCGCGCGTGAGGCTGCCGATGCGAGAATCGGAGGGGAGTACGATGAGGGAGAAATGGAGATGGTTTTGAAGCTTGGCTTGGCTTGTTGCCACCCTGACCCCCAGAGGAGACCCACCATGAAGGAAGTCGTCGCGCTTCTCCTCGGAGAGAATACGCCGGAGGCGCCCGGAAAAGTCTTGTCCGATTTGGTTAGCGGCGGCGACGATTTCGATGAGGCGGCGCCTTTGCAAACCTCCTCCACGCGGGTTTAA 2013 0.5504 MSPSKIPVAGEFSFSGMWLVILLLHLALFATPSLCLDFLFNSFTGITNLTLVKDARVDASVIRMTNDSNQYSYGRAFYPTKVPITKPSSNSSSSSITSFSTSFVFSVLPEITTSPGFGLAFVLCNTTDPPGAIASQYFGLFTNATSPTLFPLVAVEFDTGQNPEFNDINDNHIGIDLNNIESTIATPAGYYNSTGGFVPVRMRTGQNIRAWINFDGHNLLFNVTVAPIGVSRPLKPTLSHYVPTIGNYVSAEMYVGFSASKTNWIEAQRVLAWSFSDSGPARELNTTNLPVFEPEPSSSSLSGGAIAGIVVGCVVFVVICGCGFYLWWRIQKGKDEEDDEIEDWELEYWPHRFSYEELSSATGEFGKEQLLGSGGFGRVYKGTLPNKTQMAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNRWVFDRPEKLLGWEQRRRILVDVAEGLTYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYTHGEVPNTTRVVGTLGYLAPELATVAAPTSASDVYSFGVVLLEVACGRRPIETSVVEEEVVLIDWVRELYAKGCAREAADARIGGEYDEGEMEMVLKLGLACCHPDPQRRPTMKEVVALLLGENTPEAPGKVLSDLVSGGDDFDEAAPLQTSSTRV* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2111 670 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Pvu3g2111 670 Gene3D Phosphorylase Kinase; domain 1 350 440 - -
Pvu3g2111 670 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 18 654 - -
Pvu3g2111 670 Gene3D - 35 291 - -
Pvu3g2111 670 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Pvu3g2111 670 CDD lectin_legume_LecRK_Arcelin_ConA 36 279 IPR001220 GO:0030246
Pvu3g2111 670 Pfam Legume lectin domain 36 289 IPR001220 GO:0030246
Pvu3g2111 670 PANTHER - 18 654 - -
Pvu3g2111 670 Pfam Protein kinase domain 367 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2111 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Pvu3g2111 670 Gene3D Transferase(Phosphotransferase) domain 1 441 644 - -
Pvu3g2111 670 SUPERFAMILY Protein kinase-like (PK-like) 346 634 IPR011009 -
Pvu3g2111 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 292 IPR013320 -
Pvu3g2111 670 SMART serkin_6 365 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2111 670 ProSiteProfiles Protein kinase domain profile. 365 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2111 670 CDD STKc_IRAK 371 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2111 Pvu-Chr3 41894298 41896310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2111 31 636 Receptor kinase-like Gene Family AT1G15530 67.103 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu3g2111 Pkinase 7.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2111 - - gmx:100816035 1106.66