Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2109 ATGGAAGATGTGAATCACACCCCAAGAGAAGCAAAGGATTACTATTCTAGACCAATATGGTTGTCAGAAACTGCGCAAGTATTTGGGGATCTCAAGAGAAGTGACAGAAATGGAGTTAATGGCTTCCATTTTACTGCTGGTAGAGATTCCTACGTCTATAACTCCCAAGAAATAATGACTCCTGAAATTTCTGGAGCATTTGAAGAAATCAAAAGTTTATTTAGTACCAGAAACGGGGTTAATGAAGAGGTGCTTGGCCAAGAAAACGGTGACTATAGCCGCTATTCTATGCAGACGTTGTCAACAGAGATTGTGGAAATAGTTGAGGATGGCAACAGCATAACAATAAACAAAGATAGAAGGGTTGATGATCTTTATGTCGCTGTTGGCAAAGATGATTTGGATGCTGTGAAATGGACTCTTGATCATGCTGTTTCTCCCGGTTCCCGGATTTTTCTTATCCACGTCTCTTCTCCAATCACATCGATTCCTACTCCAGTTGGAAGGTTAGAAAGAAGTCAACTGACCCCACAGCAAGTAAGACTATACGTGAATGAAGTGAACAACAAGAGGAAGGATCTTTTGCAGAAGTACATTAAGATGAGTAATGAAGCCAATGTAATAGCAGAAACGTTGCTTCTGGAGAGCAATGACACAGGAAAAGCAATTCTGGATCTCATCTCTATACTTAACATAACCAACCTTGTCATTGGAATCAAAAAGCTACCTTACACACGGCGCAACAACAAATTGAGCATAGGAGAGTTCGTAAAGAAACATGCACCGAATACCTGCGAAGTTAACTTGGTTTATAACGGCGAGGTGTTTGTGTCTGATCCTTACATGGATGGCTTGGTATCCTATGGCCAAGCATCACAGAGTAAAAATCACTCCAAAAGCAACTTCTTACCGTGCATGTGCTTTTCAGGGTGCATGAGAGAAGATGATGGCAGATAG 957 0.4117 MEDVNHTPREAKDYYSRPIWLSETAQVFGDLKRSDRNGVNGFHFTAGRDSYVYNSQEIMTPEISGAFEEIKSLFSTRNGVNEEVLGQENGDYSRYSMQTLSTEIVEIVEDGNSITINKDRRVDDLYVAVGKDDLDAVKWTLDHAVSPGSRIFLIHVSSPITSIPTPVGRLERSQLTPQQVRLYVNEVNNKRKDLLQKYIKMSNEANVIAETLLLESNDTGKAILDLISILNITNLVIGIKKLPYTRRNNKLSIGEFVKKHAPNTCEVNLVYNGEVFVSDPYMDGLVSYGQASQSKNHSKSNFLPCMCFSGCMREDDGR* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2109 318 CDD STK_N 126 273 - -
Pvu3g2109 318 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 86 314 - -
Pvu3g2109 318 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 132 262 - -
Pvu3g2109 318 Gene3D HUPs 112 272 IPR014729 -
Pvu3g2109 318 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 86 314 - -
Pvu3g2109 318 Coils Coil 184 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2109 Pvu-Chr3 41886214 41888389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2109 113 278 U-box Gene Family AT3G61390 28.488 4.48e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2109 - - pvu:PHAVU_003G204300g 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2109 3 41886214 41888389 Pvu3g2109 3 41886214 41888389 ECH