Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2097 ATGCCTGTAAATCCATGGACCCTCTTCTTCTTATGCATTTCCCTTCTACTCCCATTCCATTTTCTCATAGTTGCTGCAGTGAACCAACAAGGGGAGGCTCTTCTATCATGGACGAGAACCCTGAACGGGTCCCTGGAGGTATTGAGTAACTGGGACCCAGTTCAAGACACCCCATGTAGCTGGTATGGAGTGAGTTGCAACACGAAGAACGAAGTAGTACAGCTGGATCTGAGGTATGTGGATTTGCTTGGAAGACTGCCCAGTGATTTCACCTCATTTCTTTCCTTAAGCAGTCTGATCTTAGCCGGAACTAATCTCACGGGTTCAATTCCAAAAGAAATAGGTTATCTTGTGGAACTCAGCTACTTGGACTTAAGTGACAATGCCTTGAGTGGCGAAATACCAAGTGAGCTATGTTACTTGCCTAAACTCGAGGAACTCCATCTCAACTCCAATGACCTCGTGGGGTCCATTCCAGTTGCAATTGGGAACCTCACAAAGTTGCAGAAGCTGATCCTATATGACAACCAACTCAGCGGGGAAGTTCCTACCACCATCGGCAACCTTAAGAGACTTCAAGTGATAAGAGCAGGGGGAAACAAGAACCTGGAGGGTCCTTTACCACAAGAAATTGGCAACTGTTCCAGTTTAGTGATGTTGGGCCTTGCTGAAACAAGCCTCTCAGGTTCTCTGCCCCCAACTCTTGGCCTTCTGAAGAACCTTGAAACCATTGCCATTTACACTTCCTTACTCTCAGGTGAAATACCACCTGAACTTGGGGACTGCACAGGACTTCAAAACATATACCTTTACGAGAACTCTCTCACTGGATCCATACCAAGCAAGTTGGGAAACCTTAAGAATCTCGAAAACCTTCTACTGTGGCAGAACAACCTAGTTGGCACCATGCCCCCCGAGATCGGCGACTGCGAGCAGTTGTCAGTGATTGACGTGTCAATGAACTCACTAACCGGAAGCATTCCCAACACTTTCGGGAACTTGACATCATTGCAAGAGCTCCAACTCAGTGTGAACCAGATTTCGGGGGAGATTCCAGGAGAACTGGGGAACTGTCAGCAACTCACACATGTGGAGCTTGACAACAATCTCATCACGGGTACCATACCTTCCGAATTGGGAAACCTTGCGAATCTAACGCTCTTGTTCTTATGGCACAACAAGCTGCAAGGTAACATTCCCTCTTCCCTTTCCAATTGTCAAAACCTAGAGGCTATTGATCTGTCACAGAATGGATTAACGGGTCCCATACCCAAGGGCATATTCCAGCTCAAGAATCTCAACAAGCTCTTGCTCCTATCCAATAATCTCTCGGGGAAAATCCCCTCTGAGATTGGAAATTGTTCTTCCCTAATTCGATTCCGAGCCAACGACAACAACATCACCGGGATTATTCCCTCGCAGATTGGGAATCTCAACAATTTGAATTTCCTCGACCTGGGGAACAATCGGATTTCCGGCAGTATCCCGGAGGAGATCTCCGGCTGCCGGAATCTTGCATTTCTTGATATACATTCCAACTTTCTCTCCGGAAACCTACCGGAAAGTTTGAGCCGGCTTAATGCGCTTCAGTTTCTCGATGTTTCCGATAACATGATCGAAGGTATACTGGACCCAACCGTCGGCGAACTCACCGCGCTCTCCAAGCTTGTTCTCGCGAAGAATCGAATCTCTGGCTCAATTCCGGGTCAAATCGGGTCTTGTTCCAAATTACAATTACTGGATCTCAGCAGCAACAATCTCTCCGGCCAAATCCCCGGCAGCATTGGCAACATTCCCGCTTTGGAAATTGCTCTGAATCTGAGCCTGAACCAGCTATCCGGTGAGATCCCTCCGGAGTTTTCCGGATTGACGAAACTCGGAGTGATAGACATATCTCACAACGCTCTCAGCGGAAACCTTCAGTATCTCGCGGGACTGCAAAATCTGGTGGTGCTCAATATCTCGAATAACAAATTCTCGGGACGTGTTCCGGACACGCCTTTCTTCGCGAAGCTGCCGTTGAGTGTACTAGCGAAGAACCCTGCGCTGTGCTTTTCCGGCAACGAGTGCAGTGGCGACAGCGGCGGGAGGTCGGGACGGCGGGCGAGGGTAGCGCGCGTGGTGATGGTGGTCCTGCTGTGCACCGCGTGCGTGCTGCTCATGGCGGCGCTGTACGTCGTCATCGCAGCGAAACGGCGAGGGGACCGCGAAAACGACGTGGAGCTAGATGGAAAGGACAGCGACGTGGACATGGCCCCACCTTGGGAGGTGACCCTGTACCAGAAACTCGATTTGTCCATCTCTGACGTAGCGAAATGTCTCACTGCTGGCAACGTCATCGGCCAAGGTCGATCTGGCGTCGTTTATAGAGTCGACTTGCCGGGAACGGGACTCGCCATCGCGGTGAAGAAGTTTCGGTTGTCGGAGAAATTCTCCGCTGCGGCATTCTCGTCGGAGATTGCCACGCTTGCGCGAATCCGTCACCGGAACATCGTGCGGCTGCTGGGTTGGGGGGCGAACAGGAGATCCAAGTTACTGTTCTATGATTATTTACCGAACGGTAACCTGGACACGCTGTTACACGAGGGGTGCACAGGATTAATTGATTGGGAGACGAGGCTCAAGATAGCGTTGGGCGTAGCTGAGGGCGTGGCTTACTTGCACCACGATTGCGTGCCTGCTGCTATCTTGCACCGAGACGTCAAGGCGCAGAACATTTTGTTAGGAGACAGATATGAGCCCTGTTTGGCGGATTTTGGTTTCGCTCGATTCGTGGAGGAGGATCACGCCTCCTTTTCCGTTAATCCACATTTCGCCGGCTCCTACGGTTACATTGCCCCTGAGTACGCTTGCATGCTTAAAATCACAGAGAAGAGCGACGTGTACAGCTTTGGCGTGGTCCTACTGGAGATAATAACGGGGAAAAGGCCAATGGATCCATCATTCCCGGATAGCCAACATGTTATTCAGTGGGTCAGGGAGCACCTCAAGAGCAAGAAGGACCCGATCCAGGTTCTCGATTCCAAGCTCCAGGGCCATCCAGACACACAAATCCAAGAGATGCTACAAGCACTTGGTATTGCCCTCTTGTGCACAAGTAATCGTGCAGAGGATCGACCCACAATGAAAGATGTTGCAGCATTATTGAGAGAAATTCGTCACGATCCTCCACCAGGTGCTGAGCCCCACAAGCCCAAACCCAAAACAACTCAAGCTTCCTCCTATTCCTCCTCCTCTGTCACCCCTGCTCAGTTGTTGCTCCTACAATCTACTTCCAACTCCTCATCACTTGCTTATTCCTCTTCCTCCGCAGCAGCCTACCTCCCTCCAAGGAATCAGTCCTGA 3345 0.5055 MPVNPWTLFFLCISLLLPFHFLIVAAVNQQGEALLSWTRTLNGSLEVLSNWDPVQDTPCSWYGVSCNTKNEVVQLDLRYVDLLGRLPSDFTSFLSLSSLILAGTNLTGSIPKEIGYLVELSYLDLSDNALSGEIPSELCYLPKLEELHLNSNDLVGSIPVAIGNLTKLQKLILYDNQLSGEVPTTIGNLKRLQVIRAGGNKNLEGPLPQEIGNCSSLVMLGLAETSLSGSLPPTLGLLKNLETIAIYTSLLSGEIPPELGDCTGLQNIYLYENSLTGSIPSKLGNLKNLENLLLWQNNLVGTMPPEIGDCEQLSVIDVSMNSLTGSIPNTFGNLTSLQELQLSVNQISGEIPGELGNCQQLTHVELDNNLITGTIPSELGNLANLTLLFLWHNKLQGNIPSSLSNCQNLEAIDLSQNGLTGPIPKGIFQLKNLNKLLLLSNNLSGKIPSEIGNCSSLIRFRANDNNITGIIPSQIGNLNNLNFLDLGNNRISGSIPEEISGCRNLAFLDIHSNFLSGNLPESLSRLNALQFLDVSDNMIEGILDPTVGELTALSKLVLAKNRISGSIPGQIGSCSKLQLLDLSSNNLSGQIPGSIGNIPALEIALNLSLNQLSGEIPPEFSGLTKLGVIDISHNALSGNLQYLAGLQNLVVLNISNNKFSGRVPDTPFFAKLPLSVLAKNPALCFSGNECSGDSGGRSGRRARVARVVMVVLLCTACVLLMAALYVVIAAKRRGDRENDVELDGKDSDVDMAPPWEVTLYQKLDLSISDVAKCLTAGNVIGQGRSGVVYRVDLPGTGLAIAVKKFRLSEKFSAAAFSSEIATLARIRHRNIVRLLGWGANRRSKLLFYDYLPNGNLDTLLHEGCTGLIDWETRLKIALGVAEGVAYLHHDCVPAAILHRDVKAQNILLGDRYEPCLADFGFARFVEEDHASFSVNPHFAGSYGYIAPEYACMLKITEKSDVYSFGVVLLEIITGKRPMDPSFPDSQHVIQWVREHLKSKKDPIQVLDSKLQGHPDTQIQEMLQALGIALLCTSNRAEDRPTMKDVAALLREIRHDPPPGAEPHKPKPKTTQASSYSSSSVTPAQLLLLQSTSNSSSLAYSSSSAAAYLPPRNQS* 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2097 1114 SMART LRR_typ_2 165 189 IPR003591 -
Pvu3g2097 1114 SMART LRR_typ_2 117 141 IPR003591 -
Pvu3g2097 1114 SMART LRR_typ_2 550 574 IPR003591 -
Pvu3g2097 1114 SMART LRR_typ_2 478 502 IPR003591 -
Pvu3g2097 1114 SMART LRR_typ_2 382 406 IPR003591 -
Pvu3g2097 1114 SMART LRR_typ_2 646 670 IPR003591 -
Pvu3g2097 1114 SMART LRR_typ_2 286 310 IPR003591 -
Pvu3g2097 1114 SMART LRR_typ_2 334 358 IPR003591 -
Pvu3g2097 1114 SMART LRR_typ_2 430 454 IPR003591 -
Pvu3g2097 1114 SUPERFAMILY Protein kinase-like (PK-like) 768 1079 IPR011009 -
Pvu3g2097 1114 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Pvu3g2097 1114 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Pvu3g2097 1114 Pfam Leucine rich repeat 463 513 IPR001611 GO:0005515
Pvu3g2097 1114 Pfam Leucine rich repeat 552 612 IPR001611 GO:0005515
Pvu3g2097 1114 Pfam Leucine rich repeat 312 371 IPR001611 GO:0005515
Pvu3g2097 1114 Gene3D Transferase(Phosphotransferase) domain 1 851 1060 - -
Pvu3g2097 1114 Gene3D Ribonuclease Inhibitor 29 139 IPR032675 -
Pvu3g2097 1114 ProSiteProfiles Leucine-rich repeat profile. 480 502 IPR001611 GO:0005515
Pvu3g2097 1114 ProSitePatterns Protein kinases ATP-binding region signature. 780 804 IPR017441 GO:0005524
Pvu3g2097 1114 SMART LRR_sd22_2 262 288 - -
Pvu3g2097 1114 SMART LRR_sd22_2 623 648 - -
Pvu3g2097 1114 SMART LRR_sd22_2 574 600 - -
Pvu3g2097 1114 SMART LRR_sd22_2 165 191 - -
Pvu3g2097 1114 SMART LRR_sd22_2 526 544 - -
Pvu3g2097 1114 SMART LRR_sd22_2 117 149 - -
Pvu3g2097 1114 SMART LRR_sd22_2 478 501 - -
Pvu3g2097 1114 SMART LRR_sd22_2 382 411 - -
Pvu3g2097 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Pvu3g2097 1114 PANTHER OS01G0170300 PROTEIN 6 1070 - -
Pvu3g2097 1114 MobiDBLite consensus disorder prediction 1053 1077 - -
Pvu3g2097 1114 SUPERFAMILY L domain-like 520 667 - -
Pvu3g2097 1114 Gene3D Ribonuclease Inhibitor 221 326 IPR032675 -
Pvu3g2097 1114 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 1070 - -
Pvu3g2097 1114 SUPERFAMILY L domain-like 255 541 - -
Pvu3g2097 1114 Gene3D Ribonuclease Inhibitor 604 691 IPR032675 -
Pvu3g2097 1114 Gene3D Ribonuclease Inhibitor 327 423 IPR032675 -
Pvu3g2097 1114 Gene3D Ribonuclease Inhibitor 424 520 IPR032675 -
Pvu3g2097 1114 Pfam Protein kinase domain 777 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2097 1114 Gene3D Ribonuclease Inhibitor 140 220 IPR032675 -
Pvu3g2097 1114 Gene3D Ribonuclease Inhibitor 521 603 IPR032675 -
Pvu3g2097 1114 SUPERFAMILY L domain-like 54 305 - -
Pvu3g2097 1114 Gene3D Phosphorylase Kinase; domain 1 756 850 - -
Pvu3g2097 1114 ProSiteProfiles Protein kinase domain profile. 774 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2097 1114 SMART serkin_6 774 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2097 Pvu-Chr3 41691715 41696238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2097 26 1104 Receptor kinase-like Gene Family AT5G56040 53.860 0.0 1112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu3g2097 Pkinase 3.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2097 - - gmx:100778064 1882.84