Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2086 ATGTTGCTGTCGTCGTCGTTGTTAATCCCACGTGCGGTTTGCTCCGGCACGGGTATACGCGAAACGGGTTTCACGTGCGGGGGTTCTGAGAACCCTGGGTCCAGCGCGTCCAGGTTCATGGCCCTGATGGACACGTTGTCGTTTCAGGTTAAAGAGCGAGGGTGGGGAGCGCAGACGCTGCTGGGTTCTGGGCCTCCTATGTACGCGTTGGGCCAATGCCGGCGCGACCTGAGGTCCACAGACTGCTACAAGTGTTTCAGCCAAGCGAGGCAGGTGCTGTCACGGTGCGTGCCCAAGACAGCTGGCACAATCTACCTCGACGGCTGCTTCCTCCGATACGACAACTACTCCTTCATCCGCGAGAGCGTGGACCCCACTCGTGACATCGGCATCTGCATGACCCCGACTCTGGGGGATGACGGGGGCAAACGGGTGGCGGAGATGGTGTCGAACGTGACGAAGGAGGCGGCAGAGCGTGGGTTCGCGGTGGACGGAGAGGAGGGGGTTTTCGCCCTGGCGCAGTGCTGGTCGACGTTGAACAAAGGGAGGTGCAAGATATGCTTGACAGAAGCGGCGAAGAAAGTGCAGGAATGTGTGCCGAATGTTGAGGGTAGGGGTCTATTCACTGGTTGTATATTGAGGTATTCAACGCGCAAATTCTACAACGACGTTGCACTACCTAACATCAATAATTCTACAGAAGAAAGGCCTGGTGTTTGGATGATCGTTGCATGTGTATTATCAGCGATCGTAGGGATTTTACTCATCGCCTTTGCTGCATTTATATGCTGCCAAAAAATGTCGTCACGTAGAAAAGTAAGGGACAGTGGTGGTGTGTCACCTGATTTTTCCTCCGTAGCTGGCTTCAGTTTTAGGTACGATTTGCTCGAGAAGGCCACAGATCATTTTGATCCCGCAAACAAATTAGGCCAAGGGGAAGCTGCTTCCGTGTTCAAAGGAACCCTCCCCTCTGGGGGGACTGTTGCTGTTAAACGATTGTTTTTTAATAAACGGCAATGGACAGAGGGGTTCTTCAATGAGGTCAATTTGATTAATGGGATTCAACACAAGAATGTGGTAAAGCTTTTGGGGTGCAGCATTGAAGGCCCTGAAAGTCTGTTGGTTTATGAATTTGTGCCCAGTGGAAGTCTTGATCAAGTCCTTTTCAGTAAGGACTCAGAAGATGCTCTGAACTGGGAACAACGGTTTCAAATCATATGTGGGTTAGCTGAGGGCCTAGCATACCTTCATGAAGGCTCTGGAACAAAGATTATTCACAGAGACATAAAGTCCAGCAACATTCTATTTGATGAGAATATGAATCCAAAAATAGCGGATTTTGGTCTTGCTCGCAGTGTTACTGGAAATAAATCTCATCTTAGCACAGGAAATTCGAGGACACTGGGATATATGGCTCCTGAATATGTTTCCAAAGGACAATTGACAGAGAAAGTAGACATCTATGCTTTTGGTGTGCTAATTGTTGAAATTGTGTGTGGTAAGAAGAACAGTGATCACATACCGGGGTCAACTTCACTACTCCACAGCGTCTGGAAGAATTACAAGACAAATAATATAACAGCATCCGTTGATCCAGCTCTGCACGGTAAACTTACGGTAGAAGAAGCATCAAATACGCTCCAAACTGGCCTTCTTTGTACACAATCAACTGTTACTCTCAGACCATCCATGTCTGAAGTAGTTCAGATGCTAACCAAGAAAGACTACGCTATTCCCTCCCCAAAGCAAAAACCATTCCTTAATTTCAGTGGACTAAGTCAAAATGACCGCACTGTATCCTCAAAAGGGCTCGCAAGTGCAAGGTCCTCCTTCCACAGCACCACTAGTTCACTAATTCCCAATGATGATTCGACAGTACTAGAGAATTCCTTTTCTCATTCTGACATGTTCATTGCTGGGAGCCCTGATTCAAATATCCAAATAAATATGAGGGCACCTGAGCCTAGGTAG 1971 0.4815 MLLSSSLLIPRAVCSGTGIRETGFTCGGSENPGSSASRFMALMDTLSFQVKERGWGAQTLLGSGPPMYALGQCRRDLRSTDCYKCFSQARQVLSRCVPKTAGTIYLDGCFLRYDNYSFIRESVDPTRDIGICMTPTLGDDGGKRVAEMVSNVTKEAAERGFAVDGEEGVFALAQCWSTLNKGRCKICLTEAAKKVQECVPNVEGRGLFTGCILRYSTRKFYNDVALPNINNSTEERPGVWMIVACVLSAIVGILLIAFAAFICCQKMSSRRKVRDSGGVSPDFSSVAGFSFRYDLLEKATDHFDPANKLGQGEAASVFKGTLPSGGTVAVKRLFFNKRQWTEGFFNEVNLINGIQHKNVVKLLGCSIEGPESLLVYEFVPSGSLDQVLFSKDSEDALNWEQRFQIICGLAEGLAYLHEGSGTKIIHRDIKSSNILFDENMNPKIADFGLARSVTGNKSHLSTGNSRTLGYMAPEYVSKGQLTEKVDIYAFGVLIVEIVCGKKNSDHIPGSTSLLHSVWKNYKTNNITASVDPALHGKLTVEEASNTLQTGLLCTQSTVTLRPSMSEVVQMLTKKDYAIPSPKQKPFLNFSGLSQNDRTVSSKGLASARSSFHSTTSSLIPNDDSTVLENSFSHSDMFIAGSPDSNIQINMRAPEPR* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2086 656 Pfam Protein kinase domain 306 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2086 656 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 6 652 - -
Pvu3g2086 656 Gene3D Phosphorylase Kinase; domain 1 266 378 - -
Pvu3g2086 656 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 6 652 - -
Pvu3g2086 656 ProSiteProfiles Gnk2-homologous domain profile. 123 220 IPR002902 -
Pvu3g2086 656 Gene3D - 26 118 IPR038408 -
Pvu3g2086 656 Gene3D - 140 220 IPR038408 -
Pvu3g2086 656 SUPERFAMILY Protein kinase-like (PK-like) 283 574 IPR011009 -
Pvu3g2086 656 Pfam Salt stress response/antifungal 147 217 IPR002902 -
Pvu3g2086 656 Pfam Salt stress response/antifungal 38 116 IPR002902 -
Pvu3g2086 656 ProSiteProfiles Protein kinase domain profile. 303 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2086 656 ProSiteProfiles Gnk2-homologous domain profile. 17 118 IPR002902 -
Pvu3g2086 656 SMART serkin_6 303 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2086 656 Coils Coil 655 656 - -
Pvu3g2086 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Pvu3g2086 656 Gene3D Transferase(Phosphotransferase) domain 1 379 583 - -
Pvu3g2086 656 CDD STKc_IRAK 309 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2086 Pvu-Chr3 41548707 41552606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2086 1 588 Receptor kinase-like Gene Family AT1G70520 42.577 2.16e-149 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu3g2086 Pkinase 7.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2086 - - gmx:100780384 971.459