Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2080 ATGCAGAGCACACTTCTTTCTTTCTCCCCTTTGCTCTCTCTCCGCAAACCTCACATCCCTCTCTCTCCTTCCATTCCCAAACTCAAGCACATTTGCACTTCCTCTTCCTCTTTCTCTTCCTCTTCCTCTTCCTCTTTCTCTTCATTCCCATGTCAACCATCTTCTCCTTTTTCTTTCAAACATGTTCTTTCTCGTCCCTTTCTCCATGCCAGACAAACCTCCGTGCCGGAGAACAGTTCCACCGAGTTCTCTGGAGGCAACAGTCTGCTCAACATTCTGGAAATGGTTTCCCTGTTTGGATTTTGGATCCTCTTCAACATCTACTTCAATATCTATAACAAACAGGTCTTGAAGGTTTACCATTACCCTTTAACCGTTAGCACGATTCAGTTTGCTATGGGGGCTCTCCTCGTAGCTTTCATGTTGGGTTTTAATCTCTACAAGAGGCCTAAACTCAGTGGCGCCCAGCTTGCAGCGATATGGCCATTGGCTCTGGTTCATACTTTAGGGAATATTTTTACTAACATGAGTCTTGGAAAGGTTGCTGTGTCTTTCACTCACACAATAAAAGCTATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCCATGTTCCTTGGAGAGAATCCTACTGCATGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGGGTAGTGCTAGCATCTGCTACCGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTGGACAAATCAGTCTCGTAATGTTCTTAGCAAAAAGCTCATGGTTAACACGGAGGAATCTATGGACAACATAACGCTCTTCTCAATAATAACTGTTATGTCCTTCTTGATATCAGCACCTGTAACTTTGTTAATGGAGGGTGTTAAATTTACCCCTACTTACCTGCAGTCTTCTGGATTAAATGTTAACGAAGTGTACATCAGGTCTCTTCTTGCTGCACTATGTTACCATGCGTATCAGCAAGTTGCTTATATGATACTGGAGAAGGTGTCACCTGTTACCCACTCTGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCAGTCATCTTCTTCCGAACTCCAGTATCACCAATTAACGCACTGGGCACTTGTATAGCTCTTGCCGGTGTTTTCCTGTATTCCAGGGTGAGGCGACTCAAGCCAAAGACAATTTAA 1182 0.4433 MQSTLLSFSPLLSLRKPHIPLSPSIPKLKHICTSSSSFSSSSSSSFSSFPCQPSSPFSFKHVLSRPFLHARQTSVPENSSTEFSGGNSLLNILEMVSLFGFWILFNIYFNIYNKQVLKVYHYPLTVSTIQFAMGALLVAFMLGFNLYKRPKLSGAQLAAIWPLALVHTLGNIFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAMFLGENPTAWVVGSLVPIVGGVVLASATEASFNWAGFWSAMASNWTNQSRNVLSKKLMVNTEESMDNITLFSIITVMSFLISAPVTLLMEGVKFTPTYLQSSGLNVNEVYIRSLLAALCYHAYQQVAYMILEKVSPVTHSVGNCVKRVVVIVSSVIFFRTPVSPINALGTCIALAGVFLYSRVRRLKPKTI* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2080 393 Pfam Triose-phosphate Transporter family 94 383 IPR004853 -
Pvu3g2080 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 228 - -
Pvu3g2080 393 PANTHER PLASTID PHOSPHATE TRANSLOCATOR 19 389 - -
Pvu3g2080 393 PANTHER SOLUTE CARRIER FAMILY 35 19 389 - -
Pvu3g2080 393 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 93 391 IPR004696 GO:0016021|GO:0022857|GO:0055085
Pvu3g2080 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 311 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2080 Pvu-Chr3 41498677 41502146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2080 1 391 Antiporters AT5G33320 62.530 4.26e-164 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2080 K15283 - gmx:100780925 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2080 3 41498677 41502146 Pvu9g1833 9 25948760 25952684 ECH
Pvu3g2080 3 41498677 41502146 Pvu3g2080 3 41498677 41502146 ECH
Pvu3g2080 3 41498677 41502146 Pvu9g1833 9 25948760 25952684 PCT