Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2079 ATGCATGTGCAAGAAAACTGCTTGAAACCCAGCATGGGGGATGAGCTTCCTTTTGGAGCTCCTTCCTCACAGGGTTTCTTGCAAGATTATCATCATATTGATCAGTTTCCTGTGAATAATGGCTCCTCATCCAATCCCATTTTCGGGGTACACACTCCAAATTTTGATCCCTTTGATCATAATGTAAACTGTGAGTCTGCACCTCCTGATTTTGAAGTTTTTGAGTGCAAACCTATTGCTGAGAGTAATGGTAGTGCACATGCTCATCTGATGCACAATTTCCAATATGTAGGTTATAGTTTGAACCTCCCTCGGACGAATCAAATGGATATGGTGGTGGCAAACCAAAGATACCTGCCCTTCAATGCTCTAGAAACCAAACCTTTGAATTTTGTTGTACCAGATGAAGTCTCATGCATATCCCCACCTAATTATTATAAGAGAGTTGGTTTGAATAAAAACCTTAGGGAGTCCCCAACAACTAGGAGAACATTCAAAGCTCGGAAGAAATCCAACATAGTGAAGGGGCAATGGACATCAGATGAAGACAGATTGTTGATTCAACTGGTCGACCAATATGGAGTGAGGAAGTGGTCCCACATAGCACAGGCGTTGCCTGGGAGAATAGGGAAGCAATGCAGAGAACGATGGCATAACCATTTAAGACCAGACATTAAGAAGGACATATGGACTGAAGAAGAGGATAAGATACTGATCGAAGCTCATGCGGAGATAGGAAATAAGTGGGCAGAGATTGCAAAAAAATTGACTGGAAGAACTGAAAACTCCATCAAAAACCATTGGAACGCAACAAAGAGAAGACAATATTCCAAAAGAAAATGTCGTTCAAAGTACCCTAGAGGCTCTCTTCTTCAGGAATATATCAAGAGCTTGAACTTAGACCAAAATCCACCAATGGACTATCGAAAAAAATCTGCTAAAAATGGCAATGCTAAGACAAACAATAACGGCAAAGCAGCAGCTCAGCTCCTGTGTGTTGATCAATTCTGTCCCAATGGCCAGTTGGTGCCAAAGTATGATTTTAACGAGGTCCCAGATTTTTGTTTGGATGATAACTTGTTTGAAGAGGGGTGTAGCATTGATTCTCTGTTAGATAATATACAAAGTGCTTCTACTATGGAGGGGAAGCAATCTCATCAAGGAGGCATCATGCAACGTGTTCATGTTGATGAGCATCATGAGACTGAGATGAGGGCACCAACTATGGGGATTGAAGTTAAGAAGGAGCTGGATTTGGTGGAGATGATATCACACCACGTTAATGAAAGTATTGGTATATAA 1302 0.4132 MHVQENCLKPSMGDELPFGAPSSQGFLQDYHHIDQFPVNNGSSSNPIFGVHTPNFDPFDHNVNCESAPPDFEVFECKPIAESNGSAHAHLMHNFQYVGYSLNLPRTNQMDMVVANQRYLPFNALETKPLNFVVPDEVSCISPPNYYKRVGLNKNLRESPTTRRTFKARKKSNIVKGQWTSDEDRLLIQLVDQYGVRKWSHIAQALPGRIGKQCRERWHNHLRPDIKKDIWTEEEDKILIEAHAEIGNKWAEIAKKLTGRTENSIKNHWNATKRRQYSKRKCRSKYPRGSLLQEYIKSLNLDQNPPMDYRKKSAKNGNAKTNNNGKAAAQLLCVDQFCPNGQLVPKYDFNEVPDFCLDDNLFEEGCSIDSLLDNIQSASTMEGKQSHQGGIMQRVHVDEHHETEMRAPTMGIEVKKELDLVEMISHHVNESIGI* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2079 433 ProSiteProfiles Myb-like domain profile. 222 272 IPR001005 -
Pvu3g2079 433 CDD SANT 178 221 IPR001005 -
Pvu3g2079 433 PANTHER BNAC07G50190D PROTEIN 109 350 - -
Pvu3g2079 433 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 170 225 IPR017930 -
Pvu3g2079 433 Gene3D - 229 289 - -
Pvu3g2079 433 CDD SANT 230 272 IPR001005 -
Pvu3g2079 433 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 226 276 IPR017930 -
Pvu3g2079 433 Gene3D - 174 227 - -
Pvu3g2079 433 PANTHER MYB PROTEIN-RELATED 109 350 - -
Pvu3g2079 433 SUPERFAMILY Homeodomain-like 172 268 IPR009057 -
Pvu3g2079 433 SMART sant 174 223 IPR001005 -
Pvu3g2079 433 SMART sant 226 274 IPR001005 -
Pvu3g2079 433 Pfam Myb-like DNA-binding domain 175 221 IPR001005 -
Pvu3g2079 433 Pfam Myb-like DNA-binding domain 230 269 IPR001005 -
Pvu3g2079 433 ProSiteProfiles Myb-like domain profile. 170 221 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2079 Pvu-Chr3 41494185 41495807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2079 101 374 MYB Transcription Factor Family AT4G18770 54.828 9.51e-96 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu3g2079 Myb_DNA-binding 1.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2079 K09422 - gmx:100816653 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2079 3 41494185 41495807 Pvu9g1837 9 26000967 26001838 ECH
Pvu3g2079 3 41494185 41495807 Pvu3g2079 3 41494185 41495807 ECH
Pvu3g2079 3 41494185 41495807 Pvu9g1837 9 26000967 26001838 PCT
Pvu9g1836 9 26000265 26000786 Pvu3g2079 3 41494185 41495807 PCT