Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2067 ATGGAAGCTTATGAGAACGAATCTAAGAAGGGGTTCTGGAATGCGGAGGAAGACTCGGTTCTAACTAATTACATAAAAAAGCATGGAACTGGGAAGTGGAACCGGATTCCTAGAGTGACAGGGTTGAAGAGAAGCGGGAAAAGTTGCAGACTGAGATGGATGAATTATCTAACTCCTGATGTTAAGCGTGGAGATTTCTCAGAAGAAGAAGAAGACCTTGTTCTTCGACTTCACAGTCTCCTTGGAAATAGGTGGTCTTTGATCGCGGGGAGGATTCCGGGGAGAACAGACAACCAGGTGAAGAACTTTTGGAACACTCATTTAAGCAAGAAGATTGGTGTTGATAACAAGAAAAGGAGAAGAGGTTGTGTGAGAGCAAAATATGTCCCTAGAGCTGAAGCAGAAGGTAATTGCAACACTGGTGAAGGTGATAAACTTGTTGATGAAAGTTGGAGCGATGATCTAATGGAGTTGGCAAGCATGCATGAGGCGATTATGAGAGATGATTTTGGCTGTACCTTTTCTTTTCCTAATGCTGTGTTTGATCTATGCACTGATTCTTTTCACCACTCTTTCTTTGGCCTTTGA 588 0.4269 MEAYENESKKGFWNAEEDSVLTNYIKKHGTGKWNRIPRVTGLKRSGKSCRLRWMNYLTPDVKRGDFSEEEEDLVLRLHSLLGNRWSLIAGRIPGRTDNQVKNFWNTHLSKKIGVDNKKRRRGCVRAKYVPRAEAEGNCNTGEGDKLVDESWSDDLMELASMHEAIMRDDFGCTFSFPNAVFDLCTDSFHHSFFGL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2067 195 Gene3D - 64 128 - -
Pvu3g2067 195 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Pvu3g2067 195 CDD SANT 13 57 IPR001005 -
Pvu3g2067 195 SMART sant 9 59 IPR001005 -
Pvu3g2067 195 SMART sant 62 110 IPR001005 -
Pvu3g2067 195 CDD SANT 66 108 IPR001005 -
Pvu3g2067 195 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 57 IPR017930 -
Pvu3g2067 195 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Pvu3g2067 195 Gene3D - 10 62 - -
Pvu3g2067 195 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Pvu3g2067 195 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 5 153 - -
Pvu3g2067 195 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Pvu3g2067 195 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
Pvu3g2067 195 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Pvu3g2067 195 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 5 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2067 Pvu-Chr3 41335510 41336616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2067 5 114 MYB Transcription Factor Family AT5G40330 70.000 1.16e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu3g2067 Myb_DNA-binding 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2067 K09422 - zju:107418407 208.379