LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu3g2065	GCAAAGGGATTCACTGGAACATACCGTTGGATGGCACCTGAAATGATCAAAGAAAAGCGTCACACAAAAAAAGTAGATGTCTATAGTTTCGCCATAGTTCTATGGGAAATCCTAACAGGATTGACCCCATTTGACAACATGACACCAGAGCAGGCAGCATATGCAGTGACTCACAAGAATGAAAGGCCTCCGTTACCATGCGAGTGTCCACGCGCATTTAGTCATATCATAAACAGATGCTGGTCAAGCAATCCAGATAAACGACCACATTTTGATGAGATAGTTGCAATTTTGGAGAGCTACAGTGAAGCACTTGAGGAGGATCCACAATTTCTAACCACTTACAAACCACGTCCTAATAATCTTATTCTCAGATGCTTACCAAAATGTAATTCTACTCCCAATATATCTGCTTCTTCCAAACCTTAA	429	0.4126	AKGFTGTYRWMAPEMIKEKRHTKKVDVYSFAIVLWEILTGLTPFDNMTPEQAAYAVTHKNERPPLPCECPRAFSHIINRCWSSNPDKRPHFDEIVAILESYSEALEEDPQFLTTYKPRPNNLILRCLPKCNSTPNISASSKP*	143

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu3g2065	142	Gene3D	Transferase(Phosphotransferase) domain 1	1	127	-	-
	Pvu3g2065	142	ProSiteProfiles	Protein kinase domain profile.	1	102	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu3g2065	142	PANTHER	SERINE/THREONINE-KINASE HT1-LIKE PROTEIN	3	121	-	-
	Pvu3g2065	142	SUPERFAMILY	Protein kinase-like (PK-like)	3	127	IPR011009	-
	Pvu3g2065	142	Pfam	Protein tyrosine and serine/threonine kinase	7	97	IPR001245	GO:0004672\|GO:0006468
	Pvu3g2065	142	PANTHER	SERINE-THREONINE PROTEIN KINASE	3	121	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu3g2065	Pvu-Chr3	41320941	41322073	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu3g2065	1	108	MAP Kinase Kinase Kinase	AT1G62400	66.667	2.78e-48	157

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Pvu3g2065		PK_Tyr_Ser-Thr	8.3e-26	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu3g2065	-		-	pvu:PHAVU_003G1999000	304.293

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu9g1849	9	26274584	26279156	Pvu3g2065	3	41320941	41322073	PCT