Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2059 ATGAAGGAAAGCAGTGATGGGTTTGTGAGAGCCGATCAGATTGATCTGAAGAGCATAGATGAACAGTTGGAGAGGCACCTCAACAAGGTGCTCACCATAGACAAAAAAAAGCGCTCTGATGAGGACGAAGATGCTGATCAGGTTCATGTTCACACCAGTGCCACTGCCTCTCCCAAATTCAGACCTGCCTCTACTAGGCTAAGCTTGAAGAAGCAGAAGCAGGAGTGGGAGATTGATCCTTCTAAACTCATCATCAAGAGTGTCATAGCTCGTGGCACTTTTGGGACTGTCCATCGTGGTATCTATGATACCCAAGATGTTGCTGTGAAATTGTTGGACTGGGGTGAAGAAGGACAAAGGACAGAAGCAGAAATTGCTTCCCTGAGGGCAGCGTTCACACAGGAAGTTGTTGTTTGGCATAAACTTGATCATCCCAATGTTACAAAGTTTATAGGAGCAACAATGGGGTCTTCAGAATTGCAGATACAAACTGATAATGGTCTAATTGGCATGCCAAGCAATGTCTGTTGTGTTGTTGTGGAGTATCTCGCTGGAGGAAATCTGAAATCATTCCTAATAAAGAACAGGAGGAGGAAGCTAGCTTTTAAGATTGTCATTCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAGAAGATTGTCCATAGAGATGTTAAGACAGAGAACATGCTGTTGGATAAGACACGCACAGTTAAAATTGCTGATTTTGGGGTTGCACGTGTTGAGGCATCAAATCCTAACGATATGACTGGGGAGACTGGTACTCTTGGTTATATGGCTCCAGAGGTTTTAAACGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTTCGGCATCTGTTTATGGGAAATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAAATTACATCAGCTGTTGTTCGCCAGAATTTAAGACCAGAAATGCCAAGATGTTGCCCAAGTTCTCTGGCAAATGTAATGAAGAAATGCTGGGATGCCACTCCAGATAAGCGGCCAGAGATGGATGAGGTAGTTTCCATGCTGGAGGCCATTGACACAACCAAAGGTGGAGGGATGATCCCCCATGATCAGCAGCAGGGTTGTTTTTGCTTCCGCAAGCATAGAGGGCCTTGA 1161 0.447 MKESSDGFVRADQIDLKSIDEQLERHLNKVLTIDKKKRSDEDEDADQVHVHTSATASPKFRPASTRLSLKKQKQEWEIDPSKLIIKSVIARGTFGTVHRGIYDTQDVAVKLLDWGEEGQRTEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATMGSSELQIQTDNGLIGMPSNVCCVVVEYLAGGNLKSFLIKNRRRKLAFKIVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEMPRCCPSSLANVMKKCWDATPDKRPEMDEVVSMLEAIDTTKGGGMIPHDQQQGCFCFRKHRGP* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2059 386 MobiDBLite consensus disorder prediction 34 49 - -
Pvu3g2059 386 Gene3D Phosphorylase Kinase; domain 1 71 166 - -
Pvu3g2059 386 MobiDBLite consensus disorder prediction 34 64 - -
Pvu3g2059 386 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 380 - -
Pvu3g2059 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Pvu3g2059 386 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 380 - -
Pvu3g2059 386 SUPERFAMILY Protein kinase-like (PK-like) 59 357 IPR011009 -
Pvu3g2059 386 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2059 386 PRINTS Tyrosine kinase catalytic domain signature 180 193 IPR001245 GO:0004672|GO:0006468
Pvu3g2059 386 PRINTS Tyrosine kinase catalytic domain signature 218 236 IPR001245 GO:0004672|GO:0006468
Pvu3g2059 386 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672|GO:0006468
Pvu3g2059 386 PRINTS Tyrosine kinase catalytic domain signature 328 350 IPR001245 GO:0004672|GO:0006468
Pvu3g2059 386 Gene3D Transferase(Phosphotransferase) domain 1 184 375 - -
Pvu3g2059 386 Pfam Protein tyrosine and serine/threonine kinase 85 357 IPR001245 GO:0004672|GO:0006468
Pvu3g2059 386 CDD STKc_MAP3K-like 89 357 - -
Pvu3g2059 386 SMART serkin_6 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2059 Pvu-Chr3 41229069 41233279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2059 1 318 MAP Kinase Kinase Kinase AT5G50000 80.818 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pvu3g2059 PK_Tyr_Ser-Thr 1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2059 - - gmx:100807921 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2059 3 41229069 41233279 Pvu3g2059 3 41229069 41233279 ECH