Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2056 ATGATGGCTGCTCGAAGACTTTCCTCGCTACTCTCTCGCTCTCTATCTTTTTCTTCTTCTGGAGCTGCTTCTCTGCTTCACTCATTAGCAGGAAGAAACATTAACAGATTTAGCACGGCTGCAGCAGTTGAGGACCTAATCACTCCACAAGTTCCAATACGTTATACACAGCACCTGATAAATGGACAATTTGTGGATGCTGCATCAGGGAAAACATTTCCAGCTTATGACCCGCGCTCGGGAGAAGTGATTGCTAATGTTGCTGAAGGGGATGTTGAAGACATCAACCGCGCAGTATCAGCAGCTCGCAAGGCCTTTGATGAAGGGCCTTGGCCTAAAATGACTGCATATGAAAGAAGTCGAATATTGCTTCGCTTTGCTGATTTGGTTGAGAAACACAGCGATGAGCTTGCTGCTCTGGAGACATGGAACAATGGAAAGCCTTTTGAACAGGCTGCCAAGTCAGAACTTCCATTGTTTGTGCGATTATTTCACTATTATGCTGGTTGGGCGGATAAAATTCACGGGTTGACCGTCCCAGCTGATGGAGATTATCATGTTCAGACATTGCATGAACCAGTTGGTGTAGCAGGACAAATTATACCTTGGAACTTTCCTTTAATTATGTTTGCTTGGAAAGTTGGACCAGCTCTGGCATGTGGTAACACCATTGTCCTGAAGACTGCAGAGCAAACACCACTAACAGCTCTCTTAGTTGCAAAACTATTTCATGAGGCTGGTCTTCCGAAAGGTGTTCTGAATGTAGTTTCTGGGTATGGCCCAACTGCTGGTGCAGCTCTTGCAAGCCATATGGACGTGGACAAGCTAGCATTTACTGGCTCGACAGATACTGGAAAAATTGTACTTGAATTGGCTGCAAGAAGCAATCTTAAGCCAGTGACATTGGAGCTTGGAGGGAAATCACCTTTCATAGTGTTCGAGGATGCTGATGTTGACAAGGCTGTTGAACTTGCACACTTTGCTCTGTTCTTTAATCAGGGGCAATGTTGTTGTGCTGGATCTCGTACTTTTGTACATGAGCGTGTCTATGATGAGTTCTTGGAGAAATCAAAGAAACGGGCTTTGAGACGTGTTGTTGGAGATCCATTCAAGAAAGGTGTTGAACAAGGTCCTCAGATTGACGGAGAACAATTTGAGAAAGTCCTTAGTTACATAAGGTCTGGGATTGAAAGCAATGCTACCCTTGAATGTGGGGGGAATAGATTGGGCTCAAAAGGATTCTTTATCCAGCCAACTGTCTTCTCAAATGTTCAGGATGACATGGTGATAGCACAAGACGAAATATTTGGTCCAGTTCAGTCCATCTTGAAATTCAAGGACATTGATGAAGTAATTCAACGGGCAAATAGAACACGTTATGGTCTAGCGGCAGGCGTGTTTACCAAGAACGTGGACACGGCCAACAGATTGATGCGGGCATTGAGAGCTGGAACTGTGTGGATTAATTGCTTTGATGTTTTTGATGCTGCAATTCCTTTTGGTGGGTACAAGATGAGTGGTATTGGCAGGGAGAAAGGAATCTATAGTCTTCACAACTACCTCCAGGTGAAAGCTGTTGTCACACCATTGAAGAATCCTGCTTGGATATAG 1611 0.4444 MMAARRLSSLLSRSLSFSSSGAASLLHSLAGRNINRFSTAAAVEDLITPQVPIRYTQHLINGQFVDAASGKTFPAYDPRSGEVIANVAEGDVEDINRAVSAARKAFDEGPWPKMTAYERSRILLRFADLVEKHSDELAALETWNNGKPFEQAAKSELPLFVRLFHYYAGWADKIHGLTVPADGDYHVQTLHEPVGVAGQIIPWNFPLIMFAWKVGPALACGNTIVLKTAEQTPLTALLVAKLFHEAGLPKGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAARSNLKPVTLELGGKSPFIVFEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKSKKRALRRVVGDPFKKGVEQGPQIDGEQFEKVLSYIRSGIESNATLECGGNRLGSKGFFIQPTVFSNVQDDMVIAQDEIFGPVQSILKFKDIDEVIQRANRTRYGLAAGVFTKNVDTANRLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLKNPAWI* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2056 536 CDD ALDH_F2BC 53 528 - -
Pvu3g2056 536 SUPERFAMILY ALDH-like 50 530 IPR016161 GO:0016491
Pvu3g2056 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 70 526 IPR016162 GO:0016491
Pvu3g2056 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Pvu3g2056 536 Pfam Aldehyde dehydrogenase family 64 526 IPR015590 GO:0016491
Pvu3g2056 536 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 23 536 - -
Pvu3g2056 536 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 330 341 IPR016160 GO:0016491
Pvu3g2056 536 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 302 309 IPR029510 GO:0016491
Pvu3g2056 536 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 23 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2056 Pvu-Chr3 41206815 41211557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2056 2 536 Aldehyde Dehydrogenase Gene Family AT3G48000 79.520 0.0 908
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2056 K00128 - zju:107405734 948.732