Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2053 ATGGTGGAAAGGTCGGGCTCCAATTTGTCTGACTTGGTATCTGAGGACAGTTTGAATTCTCCTCGAACTCCAGGAGATCTTCCTCAAACCCTGTCTACTCTTCTAGGAATTATGACTGATGTTGATGGCAAAGTAAGGGACAATGATGATTCAAAAGCTTTCTCATCAGAACAACATCAGAAGATCATTATAGTAGCAAATTTTCTCCCTCTCAATGCTCAAAAGGATAAAATGTCTGGCAAATGGTGCTTCACATATGATGAAGATTCAATCTTGTTGCCATTAAAGGATGGTCTCTCTTCTAACACTGAGGTTTTTTATGTGGGTTCTCTGAAGATTGATGTTGATGTCAGTGAACAAGAGAATGTTTCTCTTCAGCTACAAGAGAAATTCAATTGCTTGCCTACCTTTATTCCTTCAGACCTACAGAAACAATTTTATGATGGATTCTGCAAGCGACATTTGTGGCCGCTATTCCATTACATGTTGCCCTTTAATCCAGGCGGCAACGGCTTTGACAACTCACTGTGGAAAGCTTACGTTTCTGTTAACAAAATATTTGCTGATAAAGTCACGGAGGTTATTAATCCAGAGCTTGATTATGTATGGGTTCATGATTATCATCTCTTGGTTATTGCAACATTTCTACGGAAGCGATACAATTGGATCAAGCTAGGATTTTTTCTCCACTCTCCATTTCCTTCATCAGAAATTTACCGGGCTTTACCTGTCAGGGATGAAATTTTGAAAGCATTGCTTAATGCAGATTTAATTGGCTTTCATACATTTGATTATGCTCGCCACTTTCTTTCTTGCTGCAGTCAAATTCTTGGCTTAAAATATGAATCCAAAAGGGGTTACATCAAGCTTGAATACTTTGGCCGCATAATAGTAATTAAAATCTTGTCTATAGGGATTGATATGTGTCGACTTCAATCTGCCTTGAATCACCCTTCTTTTACATTCCATGTCAGAGAAATTTGCGAGAAGTTCAAGGGGAAAAAGCTTATTCTTGGAGTTGATGATATGGACATTTTTAAAGGTATCAGCCTAAAGTTAATGGGCATTGAGCAACTCCTTCAGCAATATCCTGAATTTCAGGGTGAATTAATACTTGTTCAGATTGTAAATCCAGCAAGGAGTACTGGTAAGGATGTAGATGAGGCAAGGAATGAGGTGCACGTTATTGCCAACAGGATAAATACAACTTTTGGTTTTCCAGATTATAAACCTGTCATCATCATGGATCGTCATGTTCCAATGTATGAGAAGGCATCCTACTATGCTTTAGCAGAATGTTGTATAGTGAATGCAGTGCGGGATGGTATGAATTTGGTTCCTTACGAGTACATTGTCTGCAGGGAGGGAGGTCCTAATAGGGATAAAACTTTACACATTGGTTCTGATCCCCCTCGAACAAGTGCAGTTGTTGTTTCTGAGTTTATTGGTTGTTCACCGTCTCTAAGTGGGGCAATCAGGGTAAACCCATGGGATATTAATGCTTTTGCCAATGCACTGAATTTGGCAATCAGAATGCCCAGTGGAGAGAAACAGTTGCGGCATGAGAAACATTATCGATACATTAGCTCTCATGATGTAGCTTACTGGGCCAAAAGTTTTCTGCACGATCTTGAGCATTCATGCAAGGATCACCAGAGCAAAAATTGCTGGGCGATAGGCCTTGGCCTTAATTTCAGAGTTTTTTCGCTTTCTCCTACTTTCAGGAAGCTTAACAAAAGCCATGCTGTTTCTTCATATAAAAGGACAAATTGCAGGGCATTATTTTTGGATTGTGACGACATAGTTGTCCCTTCCATTGATAATACCCCAAGTCCTGAAATTATAGATGTTCTAAATAACCTTTGCAGTGACCCTAAAAACATTGTTTTCATACTAAGTGGCAGGGGGAAAACCACACTCAGTGAATGTTTTGATCAGTGTCAGAATCTCTGTTTAGCAGGGGAGCATGGTTATTTTATTAAATGGAGTCAACAGTCAACTTGGGAAATGAATCATACAAATATAGTTTCTTCTTGGAAAGAGATTGTTGAACCTGTGATGAGATTGTATACTGAGGCAACCGAGGGCTCCTATATAGAGACCAAAGAGAGTGCCTTGGTATGGCACTACTGTGATGCTGATCCGGAATTTGGAACTTGGCAAGCCAAGCAGCTCTTGGATCACCTCGAGGATTTATTTTCAAACGAACCAGTAACAGTAAAGAAAGGAAAACACATTATTGAAGTCAAGTCACAGGGGATGACTAAAGGGTTAGTTGTAGAGGACATCCTGTCTAAGATGACCAAGGATGGAAAATCCCCAGATTTTGTACTGTGTATAGGGGATGATAGATCTGATGAGGATATGTTTGAGAGCCTGCTGAGTAAACTTTATAGTGAAACCTCTTCTACTGCACCAGAGATCTTTGCATGCACTGTTGGTCAAAAACCAAGTAAAGCTGGGTACTATTTAGATGATACTGAGGATGTGATGATGCTTCTTCGAGATCTTAGCACAGTTTCAGTGCCTAAACCAGCATGTCTTGAAGAAAACTCTGGTGGAGAAACAGAATCAGCCTTCTTCAAGAACGTCTGA 2595 0.3992 MVERSGSNLSDLVSEDSLNSPRTPGDLPQTLSTLLGIMTDVDGKVRDNDDSKAFSSEQHQKIIIVANFLPLNAQKDKMSGKWCFTYDEDSILLPLKDGLSSNTEVFYVGSLKIDVDVSEQENVSLQLQEKFNCLPTFIPSDLQKQFYDGFCKRHLWPLFHYMLPFNPGGNGFDNSLWKAYVSVNKIFADKVTEVINPELDYVWVHDYHLLVIATFLRKRYNWIKLGFFLHSPFPSSEIYRALPVRDEILKALLNADLIGFHTFDYARHFLSCCSQILGLKYESKRGYIKLEYFGRIIVIKILSIGIDMCRLQSALNHPSFTFHVREICEKFKGKKLILGVDDMDIFKGISLKLMGIEQLLQQYPEFQGELILVQIVNPARSTGKDVDEARNEVHVIANRINTTFGFPDYKPVIIMDRHVPMYEKASYYALAECCIVNAVRDGMNLVPYEYIVCREGGPNRDKTLHIGSDPPRTSAVVVSEFIGCSPSLSGAIRVNPWDINAFANALNLAIRMPSGEKQLRHEKHYRYISSHDVAYWAKSFLHDLEHSCKDHQSKNCWAIGLGLNFRVFSLSPTFRKLNKSHAVSSYKRTNCRALFLDCDDIVVPSIDNTPSPEIIDVLNNLCSDPKNIVFILSGRGKTTLSECFDQCQNLCLAGEHGYFIKWSQQSTWEMNHTNIVSSWKEIVEPVMRLYTEATEGSYIETKESALVWHYCDADPEFGTWQAKQLLDHLEDLFSNEPVTVKKGKHIIEVKSQGMTKGLVVEDILSKMTKDGKSPDFVLCIGDDRSDEDMFESLLSKLYSETSSTAPEIFACTVGQKPSKAGYYLDDTEDVMMLLRDLSTVSVPKPACLEENSGGETESAFFKNV* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2053 864 Gene3D Glycogen Phosphorylase B; 313 529 - -
Pvu3g2053 864 TIGRFAM T6PP: trehalose-phosphatase 607 837 IPR003337 GO:0003824|GO:0005992
Pvu3g2053 864 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 594 792 IPR006379 -
Pvu3g2053 864 Gene3D - 672 752 - -
Pvu3g2053 864 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 549 - -
Pvu3g2053 864 CDD HAD_TPP 593 832 - -
Pvu3g2053 864 Gene3D - 606 824 IPR023214 -
Pvu3g2053 864 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 846 IPR001830 GO:0003824|GO:0005992
Pvu3g2053 864 Pfam Trehalose-phosphatase 600 827 IPR003337 GO:0003824|GO:0005992
Pvu3g2053 864 Gene3D Glycogen Phosphorylase B; 52 312 - -
Pvu3g2053 864 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 846 - -
Pvu3g2053 864 CDD GT20_TPS 61 545 IPR001830 GO:0003824|GO:0005992
Pvu3g2053 864 SUPERFAMILY HAD-like 592 837 IPR036412 -
Pvu3g2053 864 MobiDBLite consensus disorder prediction 1 29 - -
Pvu3g2053 864 Pfam Glycosyltransferase family 20 61 545 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2053 Pvu-Chr3 41163057 41165961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2053 1 860 Trehalose Biosynthesis Gene Families AT1G23870 60.532 0.0 1108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2053 K16055 - gmx:100808800 1404.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2053 3 41163057 41165961 Pvu9g1863 9 26482201 26488228 PCT