Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2046 ATGGAAGAAATGGGAGTTGGAAGAAGGTTGCTGAAATGGAGTCCATTTGCAGCCATGATCATGGTTGAGTGCCTTGATGTGGGACTCTCCACTTTAGGTAAAGCAGCCATGAACAGAGGAATGAACCATTTTGTCTTTGTTCTCTACTCCAACGCCATTGCTACCCTCATACTCCTCCCTCTCGCTTTCTTCATCAACAGAACCACAAGACCGCCCCTTTCTTTAGCTCTACTCTGCAAGTTCTTCCTCGTGGGCGCTCTTTGCATAACTGTTATGCAGAATTGTGTTTTCACCGCCATTGACTACAGCTCTCCCACTCTTGGATCCGCCATGAGCAATTTGTCTCCAGCCGCCACTTTTGTGCTTGCGGTCATCTTTGGGATGGAGAAGTTGAATATTGGAAGCTCAATCAGCCAGATCAAGGTCACGGGCACACTGCTATCCATCTCTGGAGCATTACTGGTGACCCTTTACAAGGGCTTTCCCATCACCAGCTTTCGAATTCAACACTCTCCATCACAACCATTGTCATCTTTGTTGGCTCAAACAAGTAACTGGACCATTGGGGGTCTCTTCTTTGCGGCTGCTTCTCTCTCTCTCGCACTCTCGAATATTACTCAGGCATCAATTCTTAAAGGATATTCATCACAGTCAACCGTAGTAGCCTTCTATTGCATGTTTGGAACTATCCAAACTGCAATACTATCTCTCATTGTTGTCAGGGATCCAAATGACTGGAAAATAAGCCCCGGCATTGAGCTCGTGTCTATATTCTATTCAGCTATTATCGGAAATGTGGTGACATTTTCAGTACTGACTTGGTGCATAAAAAGGAAAGGACCTGTATTTGTTAGCTTGTTCAAGCCTGTGGGGATTGCCATAGCTGACTTTTCGAGCGTTATCTTCCTTGGTGAAACGCTTCATGTTGGCAGTGTCCTAGGCGCAGTGATAATCGCAATCGGATTTTACACAGTATTGTGGGCACAATCCAAAGAGGAAAACGCAAAAGGCCTCCAAGTTGATGGACAATCATTCCCATCTTCCCAAGAGAGTCCTCTACTGGAGACAATCCGTGAAAGCAATGTTTTAGCATAA 1095 0.4539 MEEMGVGRRLLKWSPFAAMIMVECLDVGLSTLGKAAMNRGMNHFVFVLYSNAIATLILLPLAFFINRTTRPPLSLALLCKFFLVGALCITVMQNCVFTAIDYSSPTLGSAMSNLSPAATFVLAVIFGMEKLNIGSSISQIKVTGTLLSISGALLVTLYKGFPITSFRIQHSPSQPLSSLLAQTSNWTIGGLFFAAASLSLALSNITQASILKGYSSQSTVVAFYCMFGTIQTAILSLIVVRDPNDWKISPGIELVSIFYSAIIGNVVTFSVLTWCIKRKGPVFVSLFKPVGIAIADFSSVIFLGETLHVGSVLGAVIIAIGFYTVLWAQSKEENAKGLQVDGQSFPSSQESPLLETIRESNVLA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2046 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 331 - -
Pvu3g2046 364 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
Pvu3g2046 364 Pfam EamA-like transporter family 27 156 IPR000620 GO:0016020|GO:0016021
Pvu3g2046 364 PANTHER WAT1-RELATED PROTEIN 11 354 - -
Pvu3g2046 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 159 - -
Pvu3g2046 364 PANTHER WAT1-RELATED PROTEIN 11 354 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2046 Pvu-Chr3 41110346 41113299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2046 15 356 Nodulin-like Gene Family AT5G40240 41.954 9.43e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2046 - - ccaj:109809148 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0758 2 10534259 10536865 Pvu3g2046 3 41110346 41113299 ECH
Pvu9g1274 9 18356925 18360571 Pvu3g2046 3 41110346 41113299 ECH
Pvu3g2046 3 41110346 41113299 Pvu3g2046 3 41110346 41113299 ECH