Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2040 ATGTCGCTCAAGCGCCGCCCCGATGATGGCAAGACTCCAGACGACAAGCGGAGGAAGCCGCCTCCTTTCTCCAGTGTGGTGCGTGACGTGATGAGATTACAATCACTCGGGCATTTGCTGGAGCCAATTCTTGAGCCATTGGTTCGTAAAGTGGTTAAGGAAGAAGTTGAGGCAGCCCTAAAGAGGCATTTAACCAGCGTGAAACAGACCTGTGGAAAGGAGTTGCATACTACTGAATTAAGAAATTTGCAACTGCAGTTTGAAAACAGCATTTCTCTGCCTGTCTTTACAGGTGGTCGGATTGAAGGAGAGGATGGCTCTAACCTAAGAATAAGTTTAGTTGATGGTCTAACAGGGGAGGTTGTCTGTACAGGACCTGAATCGATGGCTAAGGTGGAAATTGTAGTTCTTGAGGGTGATTTTGAAGAAGAAAGTGATATTTGGATGCCCGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTTCTTACAGGAGATGTAATTTTATATCTTAAAGATGGTGTTGGTATGATGGGTGAAATTTCGTATACAGATAATTCAAGCTGGACAAGGAGTCGCAGGTTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTTATTGTCAGAGATCACAGGGGAGAATTGTATAAGAAACACCATCCTCCGAGTATGTCTGATGAAGTTTGGAGACTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCCTCACTGTTAGAGAGTTTCTCACGCTTCTCAATCTGGATCCAGCAAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTACTTGATACAACTAGGCACGTGTACTTCCCCTCTAATTCTCAACAACATGGGGTGGTCTTCAATGCTGTGGGACAAGTGACTGGACTGCTTTCTGAATGCGAGTATGTCACAGTAGATAAGCTGTCTGAAACTGAAAAGGTTGAGGCTCAAAATACAATTGCCACTGCATTAAAACAAGGGGAGAAATATGCAACTTTTGAAGATGAAGATTCTCTCATGGATGGGTCTTCACACTTAACTAATGTGCTTCACTCCCCGAGCTCTCCCAAGACTGAGGGATCAAGTGCCAACAAGCTCTTGGGTCCCCAAAAGACTGGAGGATTCAATTACCCCCAAGCAAGCGCTTCTTCTCCGGATATCATGTCATCCATTTATTCTGTTGGTGGAACTAGTAGCTTGGATGACTATTGCTTGCCTAATTTCGATAGCATGGGCCTTAGATATGATCAGACCCTCAGTTTTCCAGTCCAAGTCTCGAACTCTTTGATCTGTGACACTGATTCAATTGCTCATGCTTTTAGTGATGAAGATCATCTGAAATTTTTTGATACTGATCTTCAATCTCACGTTGAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATGCACGCACGTTCTACAGCCAATGGTGGTGCGCAGAGGAGATGGAGAAAGGTATGCAACGTCCTAAAATGGTTCATGGTTAGGAAACGGGGAAACCAAATACAGGTAAGATTGTGA 1641 0.4442 MSLKRRPDDGKTPDDKRRKPPPFSSVVRDVMRLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTSVKQTCGKELHTTELRNLQLQFENSISLPVFTGGRIEGEDGSNLRISLVDGLTGEVVCTGPESMAKVEIVVLEGDFEEESDIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGVGMMGEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSMSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPSNSQQHGVVFNAVGQVTGLLSECEYVTVDKLSETEKVEAQNTIATALKQGEKYATFEDEDSLMDGSSHLTNVLHSPSSPKTEGSSANKLLGPQKTGGFNYPQASASSPDIMSSIYSVGGTSSLDDYCLPNFDSMGLRYDQTLSFPVQVSNSLICDTDSIAHAFSDEDHLKFFDTDLQSHVEADLQSAVDSFMHARSTANGGAQRRWRKVCNVLKWFMVRKRGNQIQVRL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2040 546 Pfam Calmodulin binding protein central domain 241 306 IPR046830 -
Pvu3g2040 546 Pfam Calmodulin binding protein C-terminal domain 313 370 IPR046829 -
Pvu3g2040 546 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
Pvu3g2040 546 MobiDBLite consensus disorder prediction 382 405 - -
Pvu3g2040 546 PANTHER OS02G0177800 PROTEIN 8 539 IPR012416 GO:0005516
Pvu3g2040 546 PANTHER CALMODULIN-BINDING PROTEIN 60 A 8 539 - -
Pvu3g2040 546 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2040 Pvu-Chr3 41022037 41027098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2040 1 353 Calmodulin-binding Proteins AT5G62570 60.556 1.70e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2040 - - gmx:100793156 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2040 3 41022037 41027098 Pvu3g2040 3 41022037 41027098 ECH