Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2032 ATGGCCATCTCAATTTCCAACCGTCAATTGTTCATAGACGGTGACTGGAAAGCCCCAGCCCTCAGCAGACGGATTCCCATCATCAACCCTTCCACACAACAGATCATCGGGGAGATCCCAGCCGCAACTAAGGAAGACGTCGACCTCGCCGTCGCCGCCGCCAAAGCCGCCCTCTCCCGCAACAAAGGCGCCGATTGGGCCTCTGCTTCTGGCGCTGTTCGGGCTCGCTATCTCCGCGCCATCGCTGCCAAGGTCACCGAGAAAAAACCCGAGCTCGCAAAACTCGAAGCCATCGATTGTGGAAAACCGCTGGATGAAGCCGCCTGGGACATTGACGATGTTGCTGGTTGCTTTGAGTTCTACGCTGATCTGGCTGAAAAATTGGACTCCAAGCAAAAGACTCCGGTGTCTCTTCCCATGGACACATTCAAGAGTTACGTTCTTAAGGAGCCAATTGGGGTTGTCGGATTAATAACTCCCTGGAATTATCCTCTGTTGATGGCTACGTGGAAGGTCGCTCCTGCTCTGGCAGCGGGTTGTGCGGCAATATTGAAGCCCTCTGAGTTGGCATCTGTGACCTGCTTGGAGCTTGGTGAGATTTGCAAAGAAGTGGGGCTTCCTCCTGGTGTGTTGAACATTCTCACTGGATTAGGACCTGAAGCCGGTGCTCCATTAGCAGTCCATCCTGATGTCGATAAGATTGCCTTTACTGGAAGCTCGGCAACTGGGAGCAAGATTATGGCGGCCGCAGCTCAGCTGGTCAAGCCCGTTTCACTAGAGCTAGGTGGAAAAAGTCCAATCATTGTCTTTGACGATGTTGACCTTGACAAGGCTGCCGAATGGACCATCTTTGGTTGCTTCTGGACAAATGGTCAGATATGCAGTGCAACTTCCCGCCTTATTGTTCATGAAAGTATAGCAACAGAATTTTTGAATAGAATTGCAAAATGGATAAAAAATATCAAAATTTCTGATCCCTTGGAAGAAGGTTGCAGACTAGGCCCCGTTGTTAGCGAGGGACAGTATGAAAAGGTATTGAAGTTTATCTCAAATGCCAAGAGTGAGGGTGCAACCATTTTTACTGGTGGATCTCGCCCAGAGCATTTAAAGAAGGGATTCTTTGTTGAACCGACTGTCATAACTGATGTGACTACCTCCATGCAAATTTGGAGAGAAGAAGTATTTGGACCTGTTCTTTGTGTAAAAACATTTAGCACTGAGGAAGAAGCTATTGCTCTAGCAAATGACACTGTATATGGCTTAGGGTCTGCTGTAATATCAAATGATCTAGAAAGATGTGAGCGAATTACAAAGGCTTTTAAGGCAGGAATTGTGTGGATTAATTGCTCTCAACCATGCTTCACTCAAGCCCCATGGGGAGGCATTAAACGCAGCGGTTTTGGTCGAGAACTAGGAGAATG 1421 0.4828 MAISISNRQLFIDGDWKAPALSRRIPIINPSTQQIIGEIPAATKEDVDLAVAAAKAALSRNKGADWASASGAVRARYLRAIAAKVTEKKPELAKLEAIDCGKPLDEAAWDIDDVAGCFEFYADLAEKLDSKQKTPVSLPMDTFKSYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLAVHPDVDKIAFTGSSATGSKIMAAAAQLVKPVSLELGGKSPIIVFDDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHESIATEFLNRIAKWIKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISNAKSEGATIFTGGSRPEHLKKGFFVEPTVITDVTTSMQIWREEVFGPVLCVKTFSTEEEAIALANDTVYGLGSAVISNDLERCERITKAFKAGIVWINCSQPCFTQAPWGGIKRSGFGRELGE 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2032 473 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Pvu3g2032 473 SUPERFAMILY ALDH-like 6 472 IPR016161 GO:0016491
Pvu3g2032 473 CDD ALDH_F10_BADH 27 473 - -
Pvu3g2032 473 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 473 IPR016162 GO:0016491
Pvu3g2032 473 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Pvu3g2032 473 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 473 - -
Pvu3g2032 473 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Pvu3g2032 473 Pfam Aldehyde dehydrogenase family 21 472 IPR015590 GO:0016491
Pvu3g2032 473 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2032 Pvu-Chr3 40942058 40945923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2032 1 473 Aldehyde Dehydrogenase Gene Family AT1G74920 80.761 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2032 K00130 - gmx:100170731 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2032 3 40942058 40945923 Pvu3g2032 3 40942058 40945923 ECH
Pvu3g2032 3 40942058 40945923 Pvu9g1884 9 26859474 26864172 PCT