Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2029 ATGGCCATCCTCGGCGATTTTTTCCGCCATAACTTAACGGAATTTCTCCAGGAATCCCCTTCTGGTGCGCCGGAGCTTCACGTTCTTGCAGTCGATGACAGCCTCGTTGATCGCAAGGTCATTGAACGGTTGCTCAAGATTTCTTCCTGCAAAGTGACGGTTGTGGAGAGTGGAACGCGTGCTCTTCAGTATTTGGGCTTGGACGGAGAGACTAGTTCTCTCGGGTTCGATAGTGTGAAGGTTAATCTCATAATGACGGATTATTCCATGCCAGGGATGACAGGATATGAATTACTCAAGAAAATCAAGGAGTCTTCCGTGTTTAGAGAGATTCCAGTGGTGATCATGTCGTCGGAGAATGTTTTGACTCGAATTGATAGTTGCCTGGAGGAAGGAGCAGAGGAGTTTCTTTTGAAACCTGTCAAATTGTCAGATGTAAGACGCTTAAAAGATTTCATCATGAAAGGGAAAGTGAAGGAAGTTGAGAAAAGAACTCTCAAAAGAATGCGGTCAATTGATTGCAGTCCACCTCTGTCTGCAACATGCTCAACCATCTCTCTTCCATGCGATCCATCACCATCATTGCTCTCACCATTATCCTCAAAGAAGGCTAGATTGTAA 621 0.4509 MAILGDFFRHNLTEFLQESPSGAPELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGETSSLGFDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDSCLEEGAEEFLLKPVKLSDVRRLKDFIMKGKVKEVEKRTLKRMRSIDCSPPLSATCSTISLPCDPSPSLLSPLSSKKARL* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2029 206 Pfam Response regulator receiver domain 28 147 IPR001789 GO:0000160
Pvu3g2029 206 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 206 IPR045279 GO:0009736
Pvu3g2029 206 SMART REC_2 26 150 IPR001789 GO:0000160
Pvu3g2029 206 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 8 206 - -
Pvu3g2029 206 Gene3D - 26 178 - -
Pvu3g2029 206 CDD REC_typeA_ARR 28 149 - -
Pvu3g2029 206 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
Pvu3g2029 206 SUPERFAMILY CheY-like 25 159 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2029 Pvu-Chr3 40921022 40923192 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2029 26 168 Response Regulator Gene Family AT3G48100 76.389 1.93e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu3g2029 Response_reg 2.8e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2029 K14492 - gmx:100796843 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2029 3 40921022 40923192 Pvu9g1889 9 26960006 26962365 PCT