Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu3g2027 | ATGGCGATCGTCGGCGATTTTTTCCGCCACAACTTAACGGAATTTCTCCAGGAATCCCCTTCTGCTGCTCCCGAGCTTCACGTTCTTGCCGTCGATGACAGCCTCGTTGATCGCAAGGTCATTGAACGGTTACTCAAGATTTCTTCCTGCAAAGTGACGGTTGTGGAGAGTGGAACGCGTGCTCTTCAGTATTTGGGCTTGGACGGAGAGACCAGTTCTCTCGGGTTCGATAGTGTGAAGGTTAATCTCATAATGACGGATTATTCCATGCCGGGGATGACAGGATATGAATTACTCAAGAAAATCAAGGAGTCTTCCGTGTTTAGAGAGATTCCAGTGGTGATCATGTCATCGGAGAATGTTTTGACTCGAATTGATAGTTGCCTGGAGGAAGGAGCAGAGGAGTTTCTTTTGAAACCTGTCAAATTGTCAGATGTAAGACGCTTAAAAGATTTCATCATGAAAGGGAAAGTGAAGGAGGTTGAGAAAAAATCTCTCAAAAGAATGCTATCAATTGATTGCAGTCCACCTCTGTCTGCAACATGCTCACCCATCTCTCTTCCATGCGATCCATCACCATCATTGCTCTCACCATTGTCCTCAAAGAAGGCTAGATTGTGA | 621 | 0.4541 | MAIVGDFFRHNLTEFLQESPSAAPELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGETSSLGFDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDSCLEEGAEEFLLKPVKLSDVRRLKDFIMKGKVKEVEKKSLKRMLSIDCSPPLSATCSPISLPCDPSPSLLSPLSSKKARL* | 207 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu3g2027 | 206 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 8 | 206 | IPR045279 | GO:0009736 | |
Pvu3g2027 | 206 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN | 8 | 206 | - | - | |
Pvu3g2027 | 206 | Pfam | Response regulator receiver domain | 28 | 147 | IPR001789 | GO:0000160 | |
Pvu3g2027 | 206 | SMART | REC_2 | 26 | 150 | IPR001789 | GO:0000160 | |
Pvu3g2027 | 206 | CDD | REC_typeA_ARR | 28 | 149 | - | - | |
Pvu3g2027 | 206 | ProSiteProfiles | Response regulatory domain profile. | 27 | 154 | IPR001789 | GO:0000160 | |
Pvu3g2027 | 206 | SUPERFAMILY | CheY-like | 25 | 156 | IPR011006 | - | |
Pvu3g2027 | 206 | Gene3D | - | 26 | 175 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu3g2027 | Pvu-Chr3 | 40904491 | 40906528 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu3g2027 | 22 | 170 | Response Regulator Gene Family | AT3G48100 | 74.834 | 8.24e-76 | 224 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Pvu3g2027 | Response_reg | 2.8e-20 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu3g2027 | K14492 | - | gmx:100796843 | 319.316 |