Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2019 ATGGTGTCAACATATGAGAAGAAGACGAACCTCACCAAACTCATCATCCCTTCTTCTTCTTCTTCTTCTTCCCCATCCCCATCCCCATCCATCACAAGCCCACACGTCATCCACAGTAGGTCCCACTCCTTTGTGGGCCCCTCCCCGCGCTTCAATCCCTCTTCCACCCCTCTCTACTTCGTCCACGAGGACGACGACGAAGACGAAGAAAAGGAACCTCTTGTTTCTGACCCTGTTAAGATTGGACCTTCCGATTTTCATATTCTCCGAGTTGTAGGGCAGGGTGCCTTTGGCAAAGTCTTTCTTGTTAGAAAAAAAGGAAATTGCTTCGATGGTGACGGGGTCTTCGCCATGAAGGTCATGAGAAAGGACACCGTCATAAAGAAAAACCATGTTGATTACATGAAAGCGGAGAGGGATATTCTCACTAAAGTTCTTCACCCTTTCATTGTTCAGCTACGTTACTCTTTTCAGACCAAATCTAAGTTATATTTGGTGTTGGATTTTATAAATGGAGGGCATCTCTTCTTTCATTTGTATCGCCAGGGTATCTTCAGTGAGGATCAGGCAAGGCTTTACACTGCTGAGATAGTGTCTGCTGTTTCACATCTTCACAGCAAAGGCATCGTGCATCGGGATCTTAAGCCTGAAAACATTCTAATGGATTCTCATGGGCATGTCATGCTGACTGATTTTGGAATGTCAAAAGAGATTGATGAAATGGGAAGATCAAACTCTCTTTGTGGGACAGTGGAATATATGGCTCCTGAAATTCTTCTGGCTAAAGGCCATAACAAGGATGCGGATTGGTGGAGTGTTGGTATCCTGTTGTATGAAATGCTAACAGGGAAGGCACCATTTACACACACTAACCGAAAGAAACTTCAGGAGAAAATTATTAAAGAGAAAGTTAAACTTCCACCATTCCTTACCAGTGAAGCTCACTCATTACTCAAAGGATTGCTGCAAAAGGATCCAGCGACAAGGTTAGGACATGGGCCAAATGGAGATGACCAAATCAAAAGTCATAAATGGTTTAGGTCAATCAATTGGAAAAAATTGGAGGCAAGAGAAGTGGAACCAAAGTTTAAACCAGATGTGTCTGGGAAAGACTGTACAGCTAATTTTGACAAATGTTGGACAGCAATGCCCCCTAATGACTCGCCAGCAACCACACCTACAGCAGGTGACCATTTCCAGGGCTATACTTATGTGGCACCCAACCCTTGGCTTTCATCTCGCTCACTAGAATGA 1254 0.441 MVSTYEKKTNLTKLIIPSSSSSSSPSPSPSITSPHVIHSRSHSFVGPSPRFNPSSTPLYFVHEDDDEDEEKEPLVSDPVKIGPSDFHILRVVGQGAFGKVFLVRKKGNCFDGDGVFAMKVMRKDTVIKKNHVDYMKAERDILTKVLHPFIVQLRYSFQTKSKLYLVLDFINGGHLFFHLYRQGIFSEDQARLYTAEIVSAVSHLHSKGIVHRDLKPENILMDSHGHVMLTDFGMSKEIDEMGRSNSLCGTVEYMAPEILLAKGHNKDADWWSVGILLYEMLTGKAPFTHTNRKKLQEKIIKEKVKLPPFLTSEAHSLLKGLLQKDPATRLGHGPNGDDQIKSHKWFRSINWKKLEAREVEPKFKPDVSGKDCTANFDKCWTAMPPNDSPATTPTAGDHFQGYTYVAPNPWLSSRSLE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2019 417 SUPERFAMILY Protein kinase-like (PK-like) 84 409 IPR011009 -
Pvu3g2019 417 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 17 413 - -
Pvu3g2019 417 SMART serkin_6 86 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2019 417 PANTHER RIBOSOMAL PROTEIN S6 KINASE 17 413 - -
Pvu3g2019 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Pvu3g2019 417 Pfam Protein kinase domain 86 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2019 417 Gene3D Phosphorylase Kinase; domain 1 84 388 - -
Pvu3g2019 417 ProSiteProfiles AGC-kinase C-terminal domain profile. 347 414 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pvu3g2019 417 MobiDBLite consensus disorder prediction 1 51 - -
Pvu3g2019 417 SMART pkinase_C_6 347 406 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pvu3g2019 417 ProSiteProfiles Protein kinase domain profile. 86 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2019 417 Pfam Protein kinase C terminal domain 367 404 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pvu3g2019 417 ProSitePatterns Protein kinases ATP-binding region signature. 92 119 IPR017441 GO:0005524
Pvu3g2019 417 Gene3D Transferase(Phosphotransferase) domain 1 170 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2019 Pvu-Chr3 40808465 40812235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2019 17 407 AGC Kinase Gene Family AT3G08720 60.143 3.65e-177 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pvu3g2019 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2019 K04688 - gmx:100798259 727.243