Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2007 ATGACCCTTAAGGGTGGCACAACCCAAGCCTGTGCGGCATGCAAACACCAGAGGAGAAAGTGCACTTCTGAATGCCTTCTTGCACCCTACTTCCCTGCAGACCAACCCAAGATCTTTCTCAACGTCCACAAGCTTTTCGGAGTCAGCAACATCGTTAAGATATTGAAGATTTTGGAGCCTAACCAGAAGAAAATAGCCATGGACTCTATCATTATTCAAGCAAATTATAGGGATAAGTACCCTGTGCATGGCTGTTGGGAAGAGATTTGTAGGCTGCAATACCAAATATGGCTTGCAGAAGAAGAGCTTCATGCAGTTTATCAACAGCTTGAAATATGCAGGCAGCAGCAGCAGCAACAACAGCAACTGCCTCAACATCATCACCAAGGCCCTCCTTCCATGCCTGATGATGTTACTTCACAATTAGAATTGGGCATGACACCATGTACTAATAATAATGCACTCTCATTGTTTAATCATCATACTCCACAACCAAACACTTACAACAATAATGTCACTGCATTGTCTGTGTCACAGCAACATTCCTATTCCAACAGTAACAGCATGGATTATAGCTCCCTCTACTTAGATTCCAAGGATAATGCCATTAATCCTTTGTGGGTTCAGTACCCCTGTTCAAATAATGACAATTCTATAGGAATGCAAACTCCATTGGTTTCTTCACAGCCATTGGCCATCCAACAAAATGTTGTTGAGGATTATGTTGACATGCCTCCCATTTTTGATTCACTTGATGATAGACAATCGTACATTTATTCCAAGGAGCCTTACGAATCAAGTTCAGAAGAATCACTGAAAGATATAAGAAAGTGCACAGATCATGTTTCTGAGAATGAATTGAAGAGTGCTGCAGCCTGCTTTAGCCTTACCAGTGTGAACTAA 903 0.4175 MTLKGGTTQACAACKHQRRKCTSECLLAPYFPADQPKIFLNVHKLFGVSNIVKILKILEPNQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWLAEEELHAVYQQLEICRQQQQQQQQLPQHHHQGPPSMPDDVTSQLELGMTPCTNNNALSLFNHHTPQPNTYNNNVTALSVSQQHSYSNSNSMDYSSLYLDSKDNAINPLWVQYPCSNNDNSIGMQTPLVSSQPLAIQQNVVEDYVDMPPIFDSLDDRQSYIYSKEPYESSSEESLKDIRKCTDHVSENELKSAAACFSLTSVN* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2007 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 276 - -
Pvu3g2007 300 MobiDBLite consensus disorder prediction 121 140 - -
Pvu3g2007 300 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Pvu3g2007 300 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Pvu3g2007 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2007 Pvu-Chr3 40678289 40679713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2007 1 114 AS2 family AT3G47870 63.158 5.36e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu3g2007 LOB 1.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2007 - - lang:109357116 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2007 3 40678289 40679713 Pvu3g2007 3 40678289 40679713 ECH