Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1995 ATGGAAATGGGGATTGTAGGGTGGAGTTCTCTGGTGATTATGCTGACAGTTTTCTGCCCTTCTTCTCTTGCTCTCACCCTGGATGGTCTGGCCTTGTTGGAAATCAAAAGTACTTTTAATGATACTAAGAATGTGCTGGGCAACTGGCAAGAGTTTGATGAGACTCATTGTGCATGGACTGGTATCTCTTGTCACTCTGGCGATGAGCAAAGAGTTCGCTCAATAAATCTGCCATACATGCAACTTGGAGGAATTATATCTCCCAGCATTGGTAAACTCAGTAGACTACAAAGATTGGCACTTCATCAGAACAGTTTGCATGGAACCATTCCTAATGAACTTACCAATTGTACTGAGCTAAGAGCGCTGTACTTGAGGGGTAATTTTTTCCAAGGAGGCATACCGTCAAACATTGGAAATCTTTCATATTTAAATATACTGGATTTGTCAAGTAACACGTTAAAAGGTGCTATACCTTCCTCTATTGGCCGGCTCTCACATTTGCAAATTCTGAACTTGTCTACCAATTTCTTTTCTGGTGAAATTCCTGACATTGGAGTACTAAGCACCTTTGACAAGAGCTCGTTTAATGGAAATTTAGATCTTTGTGGGCGGCAAGTCCAAAAGCCATGTCGGACATCACTTGGTTTTCCTGTGGTACTGCCCCATGCTGAAAGTGATGAAGCTGCAGTCCCAGCCAAAAGGTCTTCACATTACATGAAGGGGGTGCTAATTGGTGCAATGGCAACAATGGGTCTCGCACTTGTCATGATCCTTTCATTCCTCTGGACTCGTTTATTATCAAAGAAGGAACGAGCTGCGAAGAGATACACGGAAGTCAAGAAACAAGTTGATCCAGGAGCAAGCACAAAACTTATTACTTTCCATGGTGACCTGCCATACACATCATCTGAGATCATAGAGAAGCTGGAGTCTCTAGATGAAGAGCATATAATAGGATCAGGAGGGTATGGTACTGTTTACCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAACGGATTGATCGAAGTTGTGAAGGGTCTGATCAAGTGTTTGAAAGGGAACTAGAGATCTTGGGGAGCATCAAGCACATAAATCTAGTAAATATGCGTGGTTACTGCAGGCTTCCTTCTTCAAGACTCCTTATCTATGACTATTTGGCTTTAGGCAGCTTAGATGATCTCTTGCATGAAAATACTCAACAAAGACGACTACTGAACTGGAGTGATCGCCTAAAGATAGCTCTTGGTTCTGCCCGGGGTTTGGCTTACTTGCACCATGAATGCAGCCCAGAAATTGTTCACCGTGACATAAAATCTAGCAACATACTCCTTGATGAAAACATGGAACCACATATATCTGATTTTGGCCTCGGAAAGCTTTTGGTCGATGAAGAGGCCCATGTTACCACAGTGGTAGCTGGCACGTTTGGGTATTTGGCACCAGAGTATCTACAAAGTGGAAGAGCAACTGAGAAGTCAGATGTGTATAGCTTTGGAGTTCTATTACTCGAACTTGTAACTGGAAAGAGGCCAACAGATCCTTCCTTTGTAAAAAGAGGTTTAAATGTTGTTGGTTGGGTGAACACATTACTGAGAGATAACAGATTGGAAGATGTGGTGGACAAAAGATGCAGCGATGCAGATGCAGGAACCCTTGAAGTAATTCTTGAGCTAGCAGAAAGATGCACAGATGGAAATGCAGATGATCGTCCTTCAATGAACCAGGTGTTACAGTTGCTGGAACAAGAGGTCATGTCTCCTTGTCCAAGCGAGTTTTATGAGTCTCATTCAGATCACTGA 1809 0.4273 MEMGIVGWSSLVIMLTVFCPSSLALTLDGLALLEIKSTFNDTKNVLGNWQEFDETHCAWTGISCHSGDEQRVRSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGTIPNELTNCTELRALYLRGNFFQGGIPSNIGNLSYLNILDLSSNTLKGAIPSSIGRLSHLQILNLSTNFFSGEIPDIGVLSTFDKSSFNGNLDLCGRQVQKPCRTSLGFPVVLPHAESDEAAVPAKRSSHYMKGVLIGAMATMGLALVMILSFLWTRLLSKKERAAKRYTEVKKQVDPGASTKLITFHGDLPYTSSEIIEKLESLDEEHIIGSGGYGTVYRMVMNDCGTFAVKRIDRSCEGSDQVFERELEILGSIKHINLVNMRGYCRLPSSRLLIYDYLALGSLDDLLHENTQQRRLLNWSDRLKIALGSARGLAYLHHECSPEIVHRDIKSSNILLDENMEPHISDFGLGKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWVNTLLRDNRLEDVVDKRCSDADAGTLEVILELAERCTDGNADDRPSMNQVLQLLEQEVMSPCPSEFYESHSDH* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1995 602 Gene3D Ribonuclease Inhibitor 26 213 IPR032675 -
Pvu3g1995 602 PANTHER RECEPTOR-LIKE PROTEIN 55 2 602 - -
Pvu3g1995 602 Gene3D Phosphorylase Kinase; domain 1 274 388 - -
Pvu3g1995 602 Gene3D Transferase(Phosphotransferase) domain 1 389 593 - -
Pvu3g1995 602 PANTHER LRR RECEPTOR-LIKE KINASE 2 602 - -
Pvu3g1995 602 SUPERFAMILY L domain-like 28 186 - -
Pvu3g1995 602 ProSiteProfiles Protein kinase domain profile. 313 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1995 602 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Pvu3g1995 602 Pfam Protein kinase domain 315 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1995 602 SMART serkin_6 313 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1995 602 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Pvu3g1995 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Pvu3g1995 602 SUPERFAMILY Protein kinase-like (PK-like) 295 584 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1995 Pvu-Chr3 40544252 40548422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1995 8 592 Receptor kinase-like Gene Family AT2G35620 49.573 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pvu3g1995 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1995 - - gmx:100803920 1124.77