Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1985 ATGTTGAAGCTTTTGGTTAGAGCAGCTAGGGTTTCAACTTCACGCAACCACAGTGGCTTTGCTGCTTTCAGTTTTTCTAGTAGATGTGTTCATTCATTGCAATTTGCAACTGTAGAAGCAGAAGAGGTATCAGGTTCTAAGCCTGCTGAAGTTTTGAACCTGGTGCAAGGTAAATGGGTAGGATCTTCAAATTGGAATACAATTCTAGATCCCCTAAATGGAGACTCATTTATTAATGTTGCTGAAGTGGACGAAACAGGCATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAACATGGTGTACATAATCCTTTTAAGGCACCAGAGAGATATCTCATGTATGGAGATATATCTACTAAGGCAGCTCACATGCTATCACTTCCTAAGGTTTCAGATTTTTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGCTACCAGCAGGCTTTTGCTGAAGTGTACGTGACACAAAAGTTTCTGGAGAATTTTTGCGGGGATCAGGTTCGTTTCCTAGCAAGGTCTTTTGCCGTACCTGGAAATCATCTTGGGCAGCAAAGTCATGGTTTTCGTTGGCCATATGGTCCTGTGGCAATTATTACTCCTTTTAATTTTCCCTTGGAGATTCCCGTCCTTCAATTGATGGGTGCACTTTATATGGGCAACAAACCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTCATGGAACAAATGTTGCGCCTGCTTCATACCTGTGGCTTACCTGTGGAAGATGTAGACTTCATAAATTCAGATGGAAAGATAATGAACAAGCTGTTACTGGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGCTCAAGAGTGGCTGAGAAGTTGGCGGTTGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGTCCTGATGTCCATGAGGAAGATTACACTGCGTGGGTATGTGATCAAGATGCATATGCATGCAGTGGTCAGAAATGCTCGGCCCAATCATTATTATTTATGCATGAGAACTGGTCTAAAACTTCCTTGCTATCTAAGATGAAAGATCTTGCTGAAAGAAGAAAGCTGACAGACCTGACAATCGGCCCAGTCCTCACAGTTACTACTGATTCAATGCTTGAACATGTCAATAAGTTGCTTGAGATACCAGGATCAAAGCTGCTTTTTGGAGGTCGACCCTTGGAGGATCATTCAATTCCGTCTATTTATGGTGCAATTAAACCAACAGCTGTTTATGTTCCTCTTGAAGAAATTATGAAGGATAAGAATTTTGAGCTTGTGACAAAAGAAATATTTGGACCCTTTCAGATTGTGACCGATTACAAAAATAGTGAACTATCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTAACAGCTGCTGTAGTTTCAAACGATCCTTTATTTTTACAGGAAGTTATTGGCAAGTCGGTAAATGGTACTACTTATGCTGGTTTAAGAGCAAGAACAACTGGAGCACCGCAGAATCACTGGTTTGGACCCGCTGGTGATGCAAGAGGTGCAGGAATTGGAACACCAGAGGCCATAAAACTTGTATGGTCTTGTCACAGAGAAGTTATCTATGATTATGGGCCGGTGCCAAAGAATTGGGAAATTCCTCCATCTACTTGA 1662 0.4152 MLKLLVRAARVSTSRNHSGFAAFSFSSRCVHSLQFATVEAEEVSGSKPAEVLNLVQGKWVGSSNWNTILDPLNGDSFINVAEVDETGIQPFVESLSSCPKHGVHNPFKAPERYLMYGDISTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFAEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINSDGKIMNKLLLEANPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHEEDYTAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKMKDLAERRKLTDLTIGPVLTVTTDSMLEHVNKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIMKDKNFELVTKEIFGPFQIVTDYKNSELSVVLDALERMHNHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREVIYDYGPVPKNWEIPPST* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1985 553 SUPERFAMILY ALDH-like 53 500 IPR016161 GO:0016491
Pvu3g1985 553 Pfam Aldehyde dehydrogenase family 131 495 IPR015590 GO:0016491
Pvu3g1985 553 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Pvu3g1985 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 49 310 IPR016162 GO:0016491
Pvu3g1985 553 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 23 552 - -
Pvu3g1985 553 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 23 552 IPR044638 GO:0004029
Pvu3g1985 553 CDD ALDH_F12_P5CDH 53 541 - -
Pvu3g1985 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 311 494 IPR016163 GO:0016620
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1985 7 553 Aldehyde Dehydrogenase Gene Family AT5G62530 80.510 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1985 K00294 - gmx:100806579 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1985 3 40457712 40465204 Pvu3g1985 3 40457712 40465204 ECH