Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1981 ATGGGTAAGTCACCAGGAAAATGGATCAAAACCGTACTGTTTGGGAAAAAGTCATCCAAATCAAATATTTCAAAAGGCAGAGAGAAGCTTGTTAATAAAAAAGAAGGAGTAATAGTTACCTCCAAAGTGCCAGAAATGAGTTTGACCTTAGAACCAGCCTCCAATATTATTCCCAATCATGATGAAGTCCAGGAGCTGGAAAGCAAAGAAGCAGAAAATGTTTTACCTGGCAATCAAGAAATAGACATAGTGGGATCTACTAATGAAGAGGATGTACTAGATCCAGAGAAAATGAGGCTGGAGGAAGCAGCAACAAAGGCACAAGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCATTTAGGGCCCTCAAAGGCATAATAAGGTTGCAAGCACTCATTCGCGGGCACTTGGTTAGGAGGCAAGCTGTTGTTACATTATGCTCTATGTATGGTATTGTCAAGTTTCAAGCACTTGTTCGTGGAGGAAGAGTTAGGCAGTCTAATGTTGGATCTGAAATCCATGAGAAGTGCAATATATTGAACCCTCTGGATGGAAAATTTGTCAAGCCAATTGCTATATCCACGAAAGTTACAAAGCTGTCAGCAAATGCGTTCATTCTTAAGCTTTTTACTTCGTCAACTACAATAATGGCACTGCGTTTGCAATATGTTCCTGGTGATCCAAATTCAGTCCTAAGTTGGTTGGAGCGCTGGTCAGCATCTCAATTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCAGGATATTAAGGCTCAAAGGAAGCATGGCAGTATTTCAGTTGGCGATACTCAAACGAGTAAGTCAAAACGTACTAACAGGAAGCTTCCTACTCCGAATTTTGACTCAGTCCCAGTGCAAGCAAGTCATGAATTTGAAAAACCTAAACGAAACACAAGGAAAATTCCAAGTCAACCCTCAGATCCCGTGCAGGAAAACACACAAAATGAGTTTGAAAAGGTTAAACGTAACTTGAGAAAGGTTCATAATCCTGTTGTTGAGAATGTTGTTCCTTCAGAAGTTGAAACAGAGATGCCAAAGGAACATTTGGAAAAGGCCACAGTTACCTCATCCCTTACTGTTTCGGAACAAGAGGTTGTTAGTTTTAATGAGAAGATCAAGAAGGAAGCATCATTAACTGCTTCCAGTGTGCTGGATATAGAAACTACTCCTAGACTTTCAGCTAGTAACGAAATCCTTGACACACCAAGCAGTATTCAAGTGGCTGTGGAATCGAAGCCCTTGACTGAAATTACAACCAAAGATAAAAATATTTCTGATGAAGTAAAACATGAGCCCATAGATTTGCCAGAGTCTAATTTTAAAGATGAAAATTCTCACTTCACAAATGGAGATTTGAGTCACAAGGAAGATCCAATAGGCAGTGAAAACCAGAAACCAAACCGAAAAGCCTCTATTGTAGCAAAGCAGGAACGTGCAGAGAATGGTATACAGAATAGTCCAACATTGCCAAGTTACATGGCAGCAACTGAATCTGCAAAGGCAAAGTTGAGGGCACAAGGATCCCCAAGATTTGGACAAGATGGAAGTGAAAGAAACAACCAGACCCGGCGACATTCTTTGCCGTCCTCAACTAACAGCAAAATTAGTTCGCATTCACCTAGGACACACAGACCAGTTCAATCAGGTCAGTCAGGTGGCAAAGGGGGCAACAGAAGTGACAGAACTGTATCAACAACTTCTAGAGATGGAAATGGAAAGGTAATTCAAGCAGAGTGGAAGAGGTAA 1767 0.412 MGKSPGKWIKTVLFGKKSSKSNISKGREKLVNKKEGVIVTSKVPEMSLTLEPASNIIPNHDEVQELESKEAENVLPGNQEIDIVGSTNEEDVLDPEKMRLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCSMYGIVKFQALVRGGRVRQSNVGSEIHEKCNILNPLDGKFVKPIAISTKVTKLSANAFILKLFTSSTTIMALRLQYVPGDPNSVLSWLERWSASQFWKPVPQPKKIQDIKAQRKHGSISVGDTQTSKSKRTNRKLPTPNFDSVPVQASHEFEKPKRNTRKIPSQPSDPVQENTQNEFEKVKRNLRKVHNPVVENVVPSEVETEMPKEHLEKATVTSSLTVSEQEVVSFNEKIKKEASLTASSVLDIETTPRLSASNEILDTPSSIQVAVESKPLTEITTKDKNISDEVKHEPIDLPESNFKDENSHFTNGDLSHKEDPIGSENQKPNRKASIVAKQERAENGIQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGSERNNQTRRHSLPSSTNSKISSHSPRTHRPVQSGQSGGKGGNRSDRTVSTTSRDGNGKVIQAEWKR* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1981 588 MobiDBLite consensus disorder prediction 454 470 - -
Pvu3g1981 588 PANTHER PROTEIN IQ-DOMAIN 31 1 573 - -
Pvu3g1981 588 MobiDBLite consensus disorder prediction 425 448 - -
Pvu3g1981 588 MobiDBLite consensus disorder prediction 425 588 - -
Pvu3g1981 588 Gene3D - 97 148 - -
Pvu3g1981 588 PANTHER IQ-DOMAIN 5-RELATED 1 573 - -
Pvu3g1981 588 MobiDBLite consensus disorder prediction 264 291 - -
Pvu3g1981 588 Pfam IQ calmodulin-binding motif 124 141 IPR000048 GO:0005515
Pvu3g1981 588 Pfam IQ calmodulin-binding motif 102 121 IPR000048 GO:0005515
Pvu3g1981 588 MobiDBLite consensus disorder prediction 519 579 - -
Pvu3g1981 588 Pfam Protein of unknown function (DUF4005) 483 558 IPR025064 -
Pvu3g1981 588 SMART iq_5 122 143 IPR000048 GO:0005515
Pvu3g1981 588 SMART iq_5 99 121 IPR000048 GO:0005515
Pvu3g1981 588 MobiDBLite consensus disorder prediction 249 320 - -
Pvu3g1981 588 MobiDBLite consensus disorder prediction 485 500 - -
Pvu3g1981 588 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Pvu3g1981 588 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1981 Pvu-Chr3 40422342 40430126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1981 1 588 IQD Protein Family AT1G74690 43.499 1.45e-120 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1981 - - gmx:100794636 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1981 3 40422342 40430126 Pvu9g1957 9 28104208 28111942 ECH
Pvu2g0920 2 14854424 14859816 Pvu3g1981 3 40422342 40430126 ECH
Pvu3g0705 3 10066385 10071926 Pvu3g1981 3 40422342 40430126 ECH
Pvu3g1981 3 40422342 40430126 Pvu3g1981 3 40422342 40430126 ECH
Pvu2g0920 2 14854424 14859816 Pvu3g1981 3 40422342 40430126 PCT